Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq601 114 8e-21 >seq601 Length=120753 Score = 114 bits (126), Expect = 8e-21 Identities = 166/233 (71%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||||||||||| ||||||||| |||||| || ||||| || || || Sbjct 55590 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 55649 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || |||| || || || ||||| || || || | ||||| ||||| || || Sbjct 55650 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 55709 Query 34599 CACTCCCTCCTTGTCTGTGATCTT----TTG-TTTTAACGATAAAATTGTGTCTTCGCTC 34653 | ||||||||||| |||||| ||| ||| ||||| ||||| | Sbjct 55710 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA-----GTGTCGGATGAC 55764 Query 34654 TCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| | || || || || || || | ||| ||||| ||||||||||| Sbjct 55765 TCGACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 100 bits (110), Expect = 2e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||||||||||||| || || ||||| || || |||||||||| || Sbjct 55843 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGC 55902 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623 || || || || || | |||||| ||||| || || | |||||||| ||| ||| || Sbjct 55903 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT-TGAATCTT 55961 Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682 | || || || || ||||| ||| ||||| | || || || || || || Sbjct 55962 GGACTTCACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTCTTGCCAGT 56021 Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706 | ||| ||||| ||||||||||| Sbjct 56022 GAGCGTCTTCACGAAAATCTGCAT 56045 Score = 84.2 bits (92), Expect = 1e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563 ||||| ||| ||||||||||||||| || || ||||| || || |||| ||||| || Sbjct 56071 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGC 56130 Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTT 34622 || || || || || | |||||| ||||| || || | |||||||| || |||||| Sbjct 56131 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTT 56189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725779576068