Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq601 105 6e-18 >seq601 Length=120753 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| ||||| || || || || | ||| || ||| |||| |||||||| Sbjct 56071 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGC 56130 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201 ||||| || || || |||||||||||||||| ||| | || ||| || ||| ||| ||| Sbjct 56131 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTC 56190 Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261 || | | | | |||||||| ||||| || || | ||||| |||| || ||| Sbjct 56191 GACTTAACATTGTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTCCCGGTC 56250 Query 39262 AGCGTTTTAAC 39272 || || ||||| Sbjct 56251 AGGGTCTTAAC 56261 Score = 87.8 bits (96), Expect = 2e-12 Identities = 115/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || || | ||| || ||| |||| |||||||| ||||| || || Sbjct 56368 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 56427 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||||| ||| | || ||| || ||| ||| ||| | | | ||| Sbjct 56428 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTC-GACTTAACGT 56486 Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 | | | |||||||| ||||| || || | ||||| Sbjct 56487 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGAT 56523 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141 || || ||| ||| ||||| || || || || | ||| || ||| |||| |||||||| Sbjct 55843 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGC 55902 Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191 ||||| || || || |||||||||||||||| ||| | || ||| || || Sbjct 55903 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATC 55952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540385853348