Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq601 105 6e-18
>seq601
Length=120753
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| ||||| || || || || | ||| || ||| |||| ||||||||
Sbjct 56071 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGC 56130
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTC 39201
||||| || || || |||||||||||||||| ||| | || ||| || ||| ||| |||
Sbjct 56131 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTC 56190
Query 39202 TGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTC 39261
|| | | | | |||||||| ||||| || || | ||||| |||| || |||
Sbjct 56191 GACTTAACATTGTCGATAGTATCGCTGGACTCAACCTCAAGAGTGATGGTTTTCCCGGTC 56250
Query 39262 AGCGTTTTAAC 39272
|| || |||||
Sbjct 56251 AGGGTCTTAAC 56261
Score = 87.8 bits (96), Expect = 2e-12
Identities = 115/157 (73%), Gaps = 2/157 (1%)
Strand=Plus/Plus
Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152
||| || || || || || || | ||| || ||| |||| |||||||| ||||| || ||
Sbjct 56368 CTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAA 56427
Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212
|| |||||||||||||||| ||| | || ||| || ||| ||| ||| | | | |||
Sbjct 56428 GATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTC-GACTTAACGT 56486
Query 39213 CG-CCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
| | | |||||||| ||||| || || | |||||
Sbjct 56487 TGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGAT 56523
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 39082 TGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGT 39141
|| || ||| ||| ||||| || || || || | ||| || ||| |||| ||||||||
Sbjct 55843 TGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCTTCAAGCTGC 55902
Query 39142 TTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTC 39191
||||| || || || |||||||||||||||| ||| | || ||| || ||
Sbjct 55903 TTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATC 55952
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429540385853348
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |