Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq601 140 8e-28 seq308 93.3 1e-13 seq183 93.3 1e-13 >seq601 Length=120753 Score = 140 bits (154), Expect = 8e-28 Identities = 164/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || |||||||||||||| || || |||| ||||| || | | ||| Sbjct 55596 ACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGAGT 55655 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| |||||||||||||| || || ||||| || |||||||| Sbjct 55656 ACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACC 55715 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| ||| ||||| ||||| || | || || || | Sbjct 55716 CTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATAGTGTCGGATGACTCGACTTCAAG 55775 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | || || | ||| | ||||| Sbjct 55776 TGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || ||||| | ||||| || | | ||| | || ||| Sbjct 55834 AGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAAAGAGTACGTCCGTCT 55893 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| ||||| || ||||| ||| Sbjct 55894 TCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 55953 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||||||||| || | || || || | || || ||| Sbjct 55954 TGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGACTTCAAGTGTAATAGTC 56013 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 56014 TTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||||||||| || || || |||| ||||| || | | ||| | || || Sbjct 56348 AGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTACGTCCGTCC 56407 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || || || ||||| || Sbjct 56408 TCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTATCC 56467 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||| || || || || || || | ||||| ||| Sbjct 56468 TGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGACCTCAAGGGTGATGGTC 56527 Query 225682 TTGCCCGT 225689 ||||| || Sbjct 56528 TTGCCAGT 56535 >seq308 Length=19026 Score = 93.3 bits (102), Expect = 1e-13 Identities = 199/293 (68%), Gaps = 7/293 (2%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||| ||||| |||| ||||||||| | | || || ||||| | | Sbjct 11760 ACTTTATACTTAATGTTTGCATTATTTTCTGGTTTAGTTGGAACAGCGTTTTCAGTTTTA 11701 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAA-ATAT-TGAGTGGTAATAGCCAACTTT 7558 || || ||||| ||| ||| ||| ||| || |||| | || ||| ||| | | Sbjct 11700 ATCAGATTAGAGTTATCTGGTCCAGGTGTACAGTATATATCAGAC--AAT---CAATTAT 11646 Query 7559 ACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTA 7618 | || ||| || || |||||||| | | ||||||||||| | |||||||| | Sbjct 11645 ATAATAGTATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCAT 11586 Query 7619 TGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTT 7678 | || || ||||| || |||| || | || ||| | |||| | ||| |||||||| | Sbjct 11585 TAATTGGAGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCAT 11526 Query 7679 TTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 |||| || | || |||||||||||||||||| || ||| |||||| || Sbjct 11525 TTCCTAGATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 11473 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 11080 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 11137 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||||||| ||||| || |||||||||||||| Sbjct 11138 GCTACTTCAAAAAAGGATGTATTGAAGTTTCTATCAGTTAA 11178 >seq183 Length=38727 Score = 93.3 bits (102), Expect = 1e-13 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || || |||||||| || || || |||||||| |||||||| ||| || ||| Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24894 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 24895 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 24953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192515981811224