Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq601 156 9e-33
seq183 138 2e-27
seq243 114 3e-20
seq79 91.5 3e-13
>seq601
Length=120753
Score = 156 bits (172), Expect = 9e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || | ||||| || | ||| || || |||||||||||||| | |
Sbjct 55591 CCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAA 55650
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || || || ||||| || || || || || ||||| | || || |||||| |||
Sbjct 55651 AGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 55710
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|||||||||||||| |||||| ||||| || || ||||||||||||| || | |||||
Sbjct 55711 ATACCCTCCTTGTCCTGGATC-TTGCTCTTGACATTATCGATAGTGTCGGATGACTCGAC 55769
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || ||||| || || | ||||| ||||| ||||||||
Sbjct 55770 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | ||| || ||||| ||||||||||| |
Sbjct 55818 ACCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGA 55877
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || || || || || || || || ||||| | ||| || ||||| ||
Sbjct 55878 AAGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGG 55937
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| ||||| ||||| | || || ||||||| ||||| || | |||||
Sbjct 55938 AATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATGGTGTCGGATGACTCGAC 55997
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||| || || || ||||| || || | ||||| ||||| ||||||||
Sbjct 55998 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045
Score = 123 bits (136), Expect = 5e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | ||| || ||||| ||||||||||| |
Sbjct 56046 ACCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGA 56105
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || ||||| || || || || || ||||| | ||| || ||||| ||
Sbjct 56106 AAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGG 56165
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || |||||||| | || || | |||||||| || | || ||
Sbjct 56166 GATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATAGTATCGCTGGACTCAAC 56225
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
|| |||||||| || || || |||| ||||||||||
Sbjct 56226 CTCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAACGA 56263
Score = 116 bits (128), Expect = 8e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| |||||||| || || || | || || || |||||||||||||| |
Sbjct 56332 ACCACCACGGAGGCGAAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGA 56391
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || || || ||||| || || || || || ||||| | ||| || ||||| ||
Sbjct 56392 AAGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGG 56451
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || |||||||| | || ||| | |||||||| || | |||||
Sbjct 56452 GATGCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCGAC 56511
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| || ||||| ||||| || ||
Sbjct 56512 CTCAAGGGTGATGGTCTTGCCAGT 56535
>seq183
Length=38727
Score = 138 bits (152), Expect = 2e-27
Identities = 138/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Plus
Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971
|| |||||||||||||| || |||||||||||||| || || || ||||| ||||||
Sbjct 24775 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 24834
Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031
| ||| || ||||| || || ||||||||||| |||||||| | || ||| | |||
Sbjct 24835 AGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 24894
Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090
|| ||||| | ||||| ||||| || || ||||||||||||| ||||| |||||
Sbjct 24895 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 24953
>seq243
Length=29033
Score = 114 bits (126), Expect = 3e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||||||||| || || || | || || || ||||||||||| || |
Sbjct 22845 ACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 22786
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || ||||| ||||||| || || |||||| ||
Sbjct 22785 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGG 22726
Query 282992 AATACCCTCCTTGTCT 283007
||||||||||||||||
Sbjct 22725 AATACCCTCCTTGTCT 22710
>seq79
Length=198956
Score = 91.5 bits (100), Expect = 3e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250
|||||||| | |||||| |||| || |||| | |||||||| | | || |||
Sbjct 141413 AGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTGGCATGAACTCCAAGCTGATGT 141472
Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310
| | || ||||| ||||| ||||| || | | ||||| || || || |||| |
Sbjct 141473 GCGAGTACATCGAGTTCGTCGCTGACCGCCTGCTGGTGGCCCTCGGCAACAAGAAGTACT 141532
Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370
| ||| | | |||||||||| || |||||| ||| || || || || || ||||
Sbjct 141533 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 141592
Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410
||||||| ||||||||| | || || || | | | |||||
Sbjct 141593 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 141632
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046725842299384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |