Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq601 136 1e-26 seq183 123 6e-23 seq243 84.2 5e-11 >seq601 Length=120753 Score = 136 bits (150), Expect = 1e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || || || || || || || || ||| Sbjct 55814 CAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGAC 55755 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || ||||| ||||| |||||||| || || || ||||| |||||||| Sbjct 55754 ACTATCGATAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAG 55695 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || ||| | |||||| | || || ||| || Sbjct 55694 CGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATC 55635 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || || || || || || ||| Sbjct 55634 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 55605 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| || ||||| || || || || || || || || || || ||| Sbjct 56042 CAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGAC 55983 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || |||||||| || || || || || || || |||||||| Sbjct 55982 ACCATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAGCAG 55923 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| ||||| ||| | |||||| | || || ||| | Sbjct 55922 CGTCTCATCTTCGCAGGCAAGCAGCTTGAAGACGGACGTACTCTTTCGGACTACAACATT 55863 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 ||||| || || || || || || || Sbjct 55862 CAAAAGGAGTCCACCCTCCACCTCGT 55837 >seq183 Length=38727 Score = 123 bits (136), Expect = 6e-23 Identities = 138/183 (75%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 24954 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 24898 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || ||||| || |||||||| || Sbjct 24897 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCG 24838 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 24837 TCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 24778 Query 178106 AAA 178108 || Sbjct 24777 GAA 24775 >seq243 Length=29033 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || || || |||||||| || || ||||||||||| || |||||||| Sbjct 22711 GACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 22770 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || || | |||||| | ||||| ||| |||| || || || || || || || || Sbjct 22771 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 22826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203715838885224