Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03]
996 sequences; 30,844,022 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq601 136 1e-26
seq183 123 6e-23
seq243 84.2 5e-11
>seq601
Length=120753
Score = 136 bits (150), Expect = 1e-26
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || ||||| || || || || || || || || || || |||
Sbjct 55814 CAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGAC 55755
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| || ||||| ||||| |||||||| || || || ||||| ||||||||
Sbjct 55754 ACTATCGATAATGTCAAGAGCAAGATCCAGGACAAGGAGGGTATTCCTCCTGACCAGCAG 55695
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || ||||| || || ||| | |||||| | || || ||| ||
Sbjct 55694 CGCCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGACGTACTCTTTCGGACTACAACATC 55635
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133
|| || || || || || || || || |||
Sbjct 55634 CAGAAGGAGTCCACTCTCCACCTGGTGTTG 55605
Score = 123 bits (136), Expect = 6e-23
Identities = 151/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| || ||||| || || || || || || || || || || |||
Sbjct 56042 CAGATTTTCGTGAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCCGAC 55983
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || |||||||| || || || || || || || ||||||||
Sbjct 55982 ACCATCGATAATGTGAAGTCCAAGATTCAAGATAAGGAGGGCATTCCCCCCGACCAGCAG 55923
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || |||||||| || || ||||| ||||| ||| | |||||| | || || ||| |
Sbjct 55922 CGTCTCATCTTCGCAGGCAAGCAGCTTGAAGACGGACGTACTCTTTCGGACTACAACATT 55863
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||| || || || || || || ||
Sbjct 55862 CAAAAGGAGTCCACCCTCCACCTCGT 55837
>seq183
Length=38727
Score = 123 bits (136), Expect = 6e-23
Identities = 138/183 (75%), Gaps = 6/183 (3%)
Strand=Plus/Minus
Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985
|||||| || || || || || || || || |||||||| || || ||| |||||
Sbjct 24954 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 24898
Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045
|||||| |||||||| ||||| |||||||| || || ||||| || |||||||| ||
Sbjct 24897 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCAGCAGCG 24838
Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105
|| |||||||||||||| |||||||| ||||| | || || ||| || ||| ||||
Sbjct 24837 TCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 24778
Query 178106 AAA 178108
||
Sbjct 24777 GAA 24775
>seq243
Length=29033
Score = 84.2 bits (92), Expect = 5e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
||||| || || || || || |||||||| || || ||||||||||| || ||||||||
Sbjct 22711 GACAAGGAGGGTATTCCCCCTGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 22770
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| || | |||||| | ||||| ||| |||| || || || || || || || ||
Sbjct 22771 GACGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 22826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203715838885224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |