Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20nordicum_20[genbank_20GCA_5F001278595.1_202015-09-03] 996 sequences; 30,844,022 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq601 140 3e-28 seq183 134 1e-26 seq243 109 5e-19 >seq601 Length=120753 Score = 140 bits (154), Expect = 3e-28 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| |||||||| || || ||| ||||||||| ||||| ||||| || Sbjct 55590 GCCACCACGAAGACGCAACACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 55649 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || || || |||| || |||||||| || ||||| || |||||||| ||||| | || Sbjct 55650 AAGAGTACGTCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 55709 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812 || | |||||||||| ||| || ||| | | | ||| | |||||| ||||| Sbjct 55710 AATACCCTCCTTGTCCTGGATCTTGCTCTTGACATTATCGATA--GTGTCGGATGACTCG 55767 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || || || || || |||||||| |||||||||||||| Sbjct 55768 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 55817 Score = 129 bits (142), Expect = 5e-25 Identities = 161/218 (74%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| |||||| |||||||| ||||| || Sbjct 56047 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 56106 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 56107 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 56166 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || ||| ||| | | | ||| ||||| ||||| || Sbjct 56167 ATGCCCTCCTTATCCTGGATCTTCGACTT-AACATTGTCGATAGTATCGCTGGACTCAAC 56225 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGA 41852 ||| | || || ||||| || ||||| ||||| |||| Sbjct 56226 CTCAAGAGTGATGGTTTTCCCGGTCAGGGTCTTAACGA 56263 Score = 127 bits (140), Expect = 2e-24 Identities = 170/230 (74%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || |||||||| | || || || || ||| |||||| |||||||| ||||| || Sbjct 55819 CCACCACGTAGACGAAGGACGAGGTGGAGGGTGGACTCCTTTTGAATGTTGTAGTCCGAA 55878 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || ||||||||||| ||||| || || ||||| ||||| | |||| Sbjct 55879 AGAGTACGTCCGTCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGA 55938 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTG-CTTCA-ACGA-CGACACAGTGTCGCTCGACTCC 41812 | || |||||| | | ||| | || | ||||| | | || | |||||| ||||| Sbjct 55939 ATGCCCTCCTTAT-CTTGAATCTTGGACTTCACATTATCG--ATGGTGTCGGATGACTCG 55995 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || | || || || || || || |||||||| |||||||||||||| Sbjct 55996 ACTTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTCACGAAAATCTGCAT 56045 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | ||| || || || || ||||||||| ||||| ||||| || Sbjct 56333 CCACCACGGAGGCGAAGCACGAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCCGAA 56392 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || |||| || ||||||||||| ||||| || || ||||| ||||| | ||| Sbjct 56393 AGAGTACGTCCGTCCTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGG 56452 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| ||| || ||| |||| | | | ||| ||||| ||||| || Sbjct 56453 ATGCCCTCCTTATCCTGGATCTTCGACTT-AACGTTGTCGATAGTATCGCTGGACTCGAC 56511 Query 41815 CTCCACCGTTATCGTTTTACCCGT 41838 ||| | || || || || || || Sbjct 56512 CTCAAGGGTGATGGTCTTGCCAGT 56535 >seq183 Length=38727 Score = 134 bits (148), Expect = 1e-26 Identities = 141/183 (77%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 ||||||| ||||| |||||| |||||||| | || ||||||||||| |||||||| | Sbjct 24773 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGA 24832 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG 41792 |||| ||||| ||||| | ||| | || |||||||||| ||| || ||| ||| | Sbjct 24833 TCAGACGCTGCTGGTCGGGGGGGATGCCCTCCTTGTCCTGGATCTTGGTCTT-GACGTTG 24891 Query 41793 AC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACG 41851 | | |||||||||||||| || || | || || || ||||||||||| ||||| ||| Sbjct 24892 TCGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 24951 Query 41852 AAA 41854 ||| Sbjct 24952 AAA 24954 >seq243 Length=29033 Score = 109 bits (120), Expect = 5e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || || || | || || || || || ||||||||| ||||| || || Sbjct 22848 ACCACCACCACGCAGGCGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATC 22789 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 || || ||||| |||| |||||||||||||||||||| ||||||||||| ||||| | Sbjct 22788 CGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGG 22729 Query 41752 GGGAACGCTCTCCTTGTC 41769 ||||| | ||||||||| Sbjct 22728 GGGAATACCCTCCTTGTC 22711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462298244315200