Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq1 113 1e-19
seq4 105 1e-17
>seq1
Length=5861214
Score = 113 bits (124), Expect = 1e-19
Identities = 252/369 (68%), Gaps = 12/369 (3%)
Strand=Plus/Minus
Query 282395 GATAGGTGTGATGAACTTCTTCAAGAAACCTGGAATTTCTAGGAGACTGGGAAAACA-GC 282453
||||||||||||||||| | | ||| ||||||||| ||| |||||||| || ||
Sbjct 170651 GATAGGTGTGATGAACTCGATGAGGAACTCTGGAATTTTTAGCAGACTGGGGAATTGCGC 170592
Query 282454 TATGGAAAAAGTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 282513
| |||| |||||| || | || || || || | ||||| |||| |||||||
Sbjct 170591 T-TGGAGAAAGTTGATCAACAGTCCCTTGATATGGCTACCGTCGTGATCCTGATCGGTCA 170533
Query 282514 TGATCATCACATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTTGAA 282573
||||||| | || ||||||| ||| ||||| ||||| |||| | || |
Sbjct 170532 TGATCATGAGGTGCCCGTATCGAAGACCTTTGGTGTCGGTGTACTCTTTCTTGTGCTGCA 170473
Query 282574 GGCCCAAAATTTGTTTGAGCGCGGTG-ATTTCTTCGTTCTTTGTGATACTTG--CCACAG 282630
|||| | || | ||||| | || ||||| | |||||| | ||| ||| | | |
Sbjct 170472 GGCCAATAAAGTTTTTGA-TGTTTTGAATTTCCTGGTTCTTGGAGAT--TTGATCAAAGG 170416
Query 282631 ATGCATCGCGAACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGAC 282690
||||||| ||||| ||||||| ||| || ||||| || |||||||| | || | |
Sbjct 170415 ATGCATCACGAACATTCAGCAGCTTTCCTCGGAGGGGGAAAACACCGAAAAGATCCGGGC 170356
Query 282691 CGACCACGGACAGTCCTGCAATTGCAAG--TGTTGCTGCGGAATCTCCCTCCGTCAAGAT 282748
| || || | ||||||| || || || ||| || || || ||||| || | ||
Sbjct 170355 CCACGACAGCTCGTCCTGCCATGGCCAGACCCTTG--GCAGAGTCACCCTCGGTGAGAAT 170298
Query 282749 GAGAGTACA 282757
|||||||||
Sbjct 170297 GAGAGTACA 170289
>seq4
Length=3320884
Score = 105 bits (116), Expect = 1e-17
Identities = 160/225 (71%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 230414 AGGAGTTCATTTGTGACGCTATTCCATGTCGC-CTTATTGGCATGAACGCTGAACTTATG 230472
|||||||| | || ||| | || || ||| ||| | || |||||| | | || |||
Sbjct 1736929 AGGAGTTCCTGACGGATGCTCTGCCGTG-CGCTCTTTTGGGAATGAACTCCAAGCTGATG 1736871
Query 230473 GGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTG 230532
| ||||||||||| || || || ||||| | | ||||| || || || ||||
Sbjct 1736870 TGCCAGTACATCGAGTTTGTGGCTGACCGTCTCCTGGTTGCTCTCGGCAACAAGAAGTAC 1736811
Query 230533 TACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAAC 230592
|||||| | | |||||||| | || |||||| ||| || || || |||||||||
Sbjct 1736810 TACAACGCCACCAACCCCTTCGACTTCATGGAGTCCATCTCACTGGCTGGCAAGACCAAC 1736751
Query 230593 TTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|||||||| |||||||| | ||||| |||| | | ||||| |||
Sbjct 1736750 TTCTTCGAGAAGCGTGTGGGCGACTACCAGAAGGCCGGTGTCATG 1736706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057823417205090
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |