Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq4 116 4e-21
>seq4
Length=3320884
Score = 116 bits (128), Expect = 4e-21
Identities = 202/290 (70%), Gaps = 9/290 (3%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || |||||||||||||| ||| | |||||||| ||||||||||| |||||
Sbjct 1737349 ATGTAGGTATCGATGAGTAGAGAGTATGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 1737408
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| |||||||| | | || ||||| || |||||| ||| ||
Sbjct 1737409 AAACCGTAGAAGCAGCGGGCTTCGGGGACCTGGACTTCACCGCTGAATCGCTCCAGCAGG 1737468
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA- 17412
|| ||||| || ||||||||| |||||||| || |||| | || ||||| ||
Sbjct 1737469 TTCTCGTTGACAATGCCGTCGGAAGCGGCGAAGAAAGCCAGGACGTGAGAGATGAAGTAG 1737528
Query 17413 --TTTTTCGTCCGGTGTAAGA---ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACT 17467
| ||||| || | ||| | ||||||| | | ||| ||||| | ||| | |
Sbjct 1737529 CGCTCATCGTC--GT-TCAGACGGTTGTGCCAGTCGTGCAGATCCTTGGAGAGATCAATT 1737585
Query 17468 TCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517
|| |||| |||||| || ||| | ||||| || ||||| | ||| ||
Sbjct 1737586 TCCTCGGCGGTCCAGAAGGAGGCCTCGGCCTTCTTGTACATCTGCCAGAT 1737635
Score = 105 bits (116), Expect = 7e-18
Identities = 291/436 (67%), Gaps = 10/436 (2%)
Strand=Plus/Plus
Query 16676 TGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCC 16735
||||| |||| || || || ||||| ||||| || ||||| | || || || ||||
Sbjct 1736722 TGGTAGTCGCCCACACGCTTCTCGAAGAAGTTGGTCTTGCCAGCCAGTGAGATGGACTCC 1736781
Query 16736 ATGAAATCAAAAGGATTAGTAGC-TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAA 16794
||||| || || || || || || | | || || || || || | | | |
Sbjct 1736782 ATGAAGTCGAAGGGGTTGGTGGCGTTGTAGTACTTCTT-GTTGCCGAGAGCAACCAGGAG 1736840
Query 16795 TCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGA-C 16853
| || || ||||| || || || |||||||| | | | |||||||||| | |||| |
Sbjct 1736841 ACGGTCAGCCACAAACTCGATGTACTGGCACATCAGCTTGGAGTTCATTCCCAAAAGAGC 1736900
Query 16854 GTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAA--T 16911
| || || ||||| ||||||| || ||||| ||| | || || || ||| | |
Sbjct 1736901 GCAC-GGCAGAGCATCCGTCAGGAACTCCTGCTCGATACCGACAGCCTCGACAATCACGT 1736959
Query 16912 ACTAG-CAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGA 16970
|| | |||| | | | | | || | |||| | | || |||| ||||| || |
Sbjct 1736960 CCTCGACAACCTGCT--TGGAAGGGCGGTTGTTCAGG-TGGGAGAACAGAAGACAGGCAA 1737016
Query 16971 AATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCA 17030
| ||| || | |||||||| | ||| || ||||| || || |||| |||||||
Sbjct 1737017 AGTCGGTGTGCAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCA 1737076
Query 17031 TCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCT 17090
| || || ||||| | ||| || || | |||||| || ||||| ||||| |||||||
Sbjct 1737077 TGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAAATACCCT 1737136
Query 17091 CGACGGATGCAAACGC 17106
|||||| ||||| ||
Sbjct 1737137 CGACGGCAGCAAAGGC 1737152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517545321819240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |