Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq7 98.7 2e-15
seq1 91.5 3e-13
>seq7
Length=1666898
Score = 98.7 bits (108), Expect = 2e-15
Identities = 266/406 (66%), Gaps = 27/406 (7%)
Strand=Plus/Plus
Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060
|| || ||| |||| || | || ||||||||||||||||| || ||||| ||||| ||
Sbjct 1160265 CTCCCCCATATGCTCTTTTATGGACCTCCCGGAACAGGCAAAACTTCAACAATCCTCGCA 1160324
Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120
||||| | | || || || || | | ||| | || || |||||||
Sbjct 1160325 TTGGCCAAATCTCTCTTCGGTCCGGCCCTCTATCGCTCCCGCATTCTGGAATTGAACGCC 1160384
Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT------------ 254167
|| ||||| ||||| | | ||||||| |||||| |||||| ||||
Sbjct 1160385 TCCGACGAGCGCGGTATCGGAATCGTCCGTGACAAGGTCAAGAACTTTGCTCGTGCGCAA 1160444
Query 254168 --CTCCAA-------GATGTCGAT--TTCGT--CGTTC-CAACCCGGCTGTCCGCCTTTC 254213
|||| | | ||||| | ||| ||| | ||| || || || |||
Sbjct 1160445 CTCTCCCAACCTACCGGCCTCGATGCTGCGTACCGTGCGCAATATCCATGCCCACCCTTC 1160504
Query 254214 AAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGC 254273
||| || | ||||| |||||||| |||| |||||| ||||| ||||| || |||||
Sbjct 1160505 AAGATCATCATCCTCGACGAGGCAGACAGCATGACTCAGGACGCCCAGTCTGCGCTCCGT 1160564
Query 254274 CGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCG 254333
|| || ||||| | | || | |||||||| || || || ||||||||||| |
Sbjct 1160565 CGCACAATGGAACAGTATTCTCGCATCACGCGTTTCTGTCTCGTCTGCAACTACGTCACA 1160624
Query 254334 AAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
|||||||| || || || ||| ||| |||||| |||||||
Sbjct 1160625 CGGATCATCGAGCCTCTAGCCAGTCGTTGCAGCAAGTTCCGATTCA 1160670
>seq1
Length=5861214
Score = 91.5 bits (100), Expect = 3e-13
Identities = 121/168 (72%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059
||| |||||| | ||| || | |||||||||||||| |||||||| || || || ||||
Sbjct 5749879 CCTACCTCATCTCCTTCTCTATGGTCCTCCCGGAACGGGCAAGACATCTACTATTTTGGC 5749820
Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119
|| ||||| | | || | ||||||| | || ||||||||||| || ||
Sbjct 5749819 ACTTGCCCGGCGGATATACGGGACGAAGAACATGCGGCAGATGGTGCTCGAGCTCAATGC 5749760
Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167
|||||| || || | ||||||||||| || ||||||| |||||
Sbjct 5749759 CAGTGACGATCGTGGCATTGACGTCGTCCGAGAACAGATCAAAACTTT 5749712
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765808421824
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |