Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq7 98.7 2e-15 seq1 91.5 3e-13 >seq7 Length=1666898 Score = 98.7 bits (108), Expect = 2e-15 Identities = 266/406 (66%), Gaps = 27/406 (7%) Strand=Plus/Plus Query 254001 CTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGCG 254060 || || ||| |||| || | || ||||||||||||||||| || ||||| ||||| || Sbjct 1160265 CTCCCCCATATGCTCTTTTATGGACCTCCCGGAACAGGCAAAACTTCAACAATCCTCGCA 1160324 Query 254061 CTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGCT 254120 ||||| | | || || || || | | ||| | || || ||||||| Sbjct 1160325 TTGGCCAAATCTCTCTTCGGTCCGGCCCTCTATCGCTCCCGCATTCTGGAATTGAACGCC 1160384 Query 254121 TCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGA-CTTT------------ 254167 || ||||| ||||| | | ||||||| |||||| |||||| |||| Sbjct 1160385 TCCGACGAGCGCGGTATCGGAATCGTCCGTGACAAGGTCAAGAACTTTGCTCGTGCGCAA 1160444 Query 254168 --CTCCAA-------GATGTCGAT--TTCGT--CGTTC-CAACCCGGCTGTCCGCCTTTC 254213 |||| | | ||||| | ||| ||| | ||| || || || ||| Sbjct 1160445 CTCTCCCAACCTACCGGCCTCGATGCTGCGTACCGTGCGCAATATCCATGCCCACCCTTC 1160504 Query 254214 AAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAGTCCGCCCTCCGC 254273 ||| || | ||||| |||||||| |||| |||||| ||||| ||||| || ||||| Sbjct 1160505 AAGATCATCATCCTCGACGAGGCAGACAGCATGACTCAGGACGCCCAGTCTGCGCTCCGT 1160564 Query 254274 CGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTGCAACTACGTGTCG 254333 || || ||||| | | || | |||||||| || || || ||||||||||| | Sbjct 1160565 CGCACAATGGAACAGTATTCTCGCATCACGCGTTTCTGTCTCGTCTGCAACTACGTCACA 1160624 Query 254334 AAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 |||||||| || || || ||| ||| |||||| ||||||| Sbjct 1160625 CGGATCATCGAGCCTCTAGCCAGTCGTTGCAGCAAGTTCCGATTCA 1160670 >seq1 Length=5861214 Score = 91.5 bits (100), Expect = 3e-13 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 254000 CCTTCCTCATTTGCTTTTCCACGGTCCTCCCGGAACAGGCAAGACGTCAACCATCCTGGC 254059 ||| |||||| | ||| || | |||||||||||||| |||||||| || || || |||| Sbjct 5749879 CCTACCTCATCTCCTTCTCTATGGTCCTCCCGGAACGGGCAAGACATCTACTATTTTGGC 5749820 Query 254060 GCTGGCCCGAACCCTGTTGGGCGAGGGGAACATGAGAGAGCGCGTGCTCGAGCTGAACGC 254119 || ||||| | | || | ||||||| | || ||||||||||| || || Sbjct 5749819 ACTTGCCCGGCGGATATACGGGACGAAGAACATGCGGCAGATGGTGCTCGAGCTCAATGC 5749760 Query 254120 TTCTGACGAACGCGGGTTGGACGTCGTCCGCGACAAGATCAAGACTTT 254167 |||||| || || | ||||||||||| || ||||||| ||||| Sbjct 5749759 CAGTGACGATCGTGGCATTGACGTCGTCCGAGAACAGATCAAAACTTT 5749712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765808421824