Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq6 147 3e-30
seq4 107 2e-18
>seq6
Length=1791946
Score = 147 bits (162), Expect = 3e-30
Identities = 621/967 (64%), Gaps = 24/967 (2%)
Strand=Plus/Minus
Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008
|| |||| |||||||| || ||||||| | | | || | | ||||| |||||
Sbjct 1448267 GAAGCCAAGTTACACACAGCAACCTCATCGGGAGCACTGTACTCGACAATCTCCGTGCAC 1448208
Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068
|| || | ||| || || || || | || || ||||| ||||| || ||||||
Sbjct 1448207 AGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 1448148
Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128
|| || || ||||| || |||| || ||| |||||| || | ||| || | ||||| |
Sbjct 1448147 TTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGA-G 1448089
Query 63129 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTA--TACAAT 63185
|| ||||||| || | || | | | || ||| |||| | ||||
Sbjct 1448088 CTTCTGAGCCTTGATGGTC--TTGCGACCACGGCCTTCCTTCTCATAGCGCTCGTACAGA 1448031
Query 63186 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAAC 63245
|||||||| || || |||| | |||| | |||| |||| || || | ||
Sbjct 1448030 GCATCGAACTCATCACCGTAAACGTCAGCCAAGCCAGGAGCCTCATTGGGGCAGAACAGA 1447971
Query 63246 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63305
| ||| || |||| ||| || || |||||||||||||| || |||| || ||
Sbjct 1447970 GTCCAGTCGCCGTTGGCCTCGACACGCTTCATAAAGAGATCGGGTGTCCAGAGGGCGTAG 1447911
Query 63306 AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63365
|| || || | | | | ||||| || || ||||| |||||||||||| |
Sbjct 1447910 AACAGGTCACGAGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGGAGATCGAGGAACTCG 1447851
Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425
| | || | ||||| || || | ||| ||||| | | ||||| || ||||| ||
Sbjct 1447850 AAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCAGGACGCTTGTTACCA 1447791
Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485
||||| || | ||| | || ||||| || | |||| | ||| || | ||| |||||
Sbjct 1447790 CCCTGGTCAACGTAGCGGGCAGTGTTGTTGAACACTCGGAGCATGGGCACAATGCCGTTG 1447731
Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATA 63543
|| ||||||||| || || || ||| |||||||||| | |||| |
Sbjct 1447730 GAGGAACCATTGGTTCCACCAATGTAAGAGCCAGTGGCACGAATGCGGTGAACATTG--A 1447673
Query 63544 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGC 63603
|||| ||||| || || | || || || | || || || | || || ||||| |
Sbjct 1447672 GACCAATTCCACCAGCAGTCTTGGAAATCATAGCACAGGTCTTGAGAGTATCGTAGATAC 1447613
Query 63604 CTTCTATGCTATCATCGATCATGT----TAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659
| || ||||| || || |||||| ||| || || ||| || | | ||| ||
Sbjct 1447612 CGTCAATGCTGTCCTCTTTCATGTCCACCAAGAAGCAAGAAGCAAG-CTGAGGCTGAGGA 1447554
Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719
|||| |||| || || || || ||||||||||| || || | || | || | |
Sbjct 1447553 GTAG---CCGCGTTGAACAAAGTGGGAGAAGCGTGAGTGAAGTACTTCTGGGACATCAAG 1447497
Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCAT 63778
| || ||||||||||| || ||||| || | |||||||| || || || |||||
Sbjct 1447496 TGATATGTCTCAATAGCCTTCTCGATATCTTCACCG-TGAATTCCAACAGCAACGCGCAT 1447438
Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838
| | ||||| || | || ||| ||| ||| || | | ||| || ||
Sbjct 1447437 CAGGAGATGCTGGGGCCGCTCGGCAACGTTGCCGTTGATACGGAGAAGGTATGAACGCTC 1447378
Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAA 63896
|| ||| || || || || ||||||| ||||| || || ||||| | ||| | ||
Sbjct 1447377 CAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTAGACAATGGCGGAG 1447320
Query 63897 TTGAGCT 63903
|||||||
Sbjct 1447319 TTGAGCT 1447313
>seq4
Length=3320884
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| | ||| || || ||| |||||| |||||||| | | || | ||||| ||
Sbjct 1737001 AACAGAAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAG 1737060
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| || || |||||||| ||||||||||| || ||||| || ||||| ||||| || ||
Sbjct 1737061 AAGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCA 1737120
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724
|| ||||| || || || || |||||||||||
Sbjct 1737121 GAGAAGAAAATACCCTCGACGGCAGCAAAGGC 1737152
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629817261473040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |