Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 147 3e-30 seq4 107 2e-18 >seq6 Length=1791946 Score = 147 bits (162), Expect = 3e-30 Identities = 621/967 (64%), Gaps = 24/967 (2%) Strand=Plus/Minus Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008 || |||| |||||||| || ||||||| | | | || | | ||||| ||||| Sbjct 1448267 GAAGCCAAGTTACACACAGCAACCTCATCGGGAGCACTGTACTCGACAATCTCCGTGCAC 1448208 Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068 || || | ||| || || || || | || || ||||| ||||| || |||||| Sbjct 1448207 AGGTTGGAGCTGCGGATGGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCC 1448148 Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128 || || || ||||| || |||| || ||| |||||| || | ||| || | ||||| | Sbjct 1448147 TTGTAGAGCATGAAGGGGTTACCGGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGA-G 1448089 Query 63129 ACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTTTCGTATAGAGTA--TACAAT 63185 || ||||||| || | || | | | || ||| |||| | |||| Sbjct 1448088 CTTCTGAGCCTTGATGGTC--TTGCGACCACGGCCTTCCTTCTCATAGCGCTCGTACAGA 1448031 Query 63186 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAAC 63245 |||||||| || || |||| | |||| | |||| |||| || || | || Sbjct 1448030 GCATCGAACTCATCACCGTAAACGTCAGCCAAGCCAGGAGCCTCATTGGGGCAGAACAGA 1447971 Query 63246 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63305 | ||| || |||| ||| || || |||||||||||||| || |||| || || Sbjct 1447970 GTCCAGTCGCCGTTGGCCTCGACACGCTTCATAAAGAGATCGGGTGTCCAGAGGGCGTAG 1447911 Query 63306 AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63365 || || || | | | | ||||| || || ||||| |||||||||||| | Sbjct 1447910 AACAGGTCACGAGCACGAATCTCCTCCTTGCCGTGGTTCTTGCGGAGATCGAGGAACTCG 1447851 Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425 | | || | ||||| || || | ||| ||||| | | ||||| || ||||| || Sbjct 1447850 AAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCAGGACGCTTGTTACCA 1447791 Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485 ||||| || | ||| | || ||||| || | |||| | ||| || | ||| ||||| Sbjct 1447790 CCCTGGTCAACGTAGCGGGCAGTGTTGTTGAACACTCGGAGCATGGGCACAATGCCGTTG 1447731 Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATA 63543 || ||||||||| || || || ||| |||||||||| | |||| | Sbjct 1447730 GAGGAACCATTGGTTCCACCAATGTAAGAGCCAGTGGCACGAATGCGGTGAACATTG--A 1447673 Query 63544 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGC 63603 |||| ||||| || || | || || || | || || || | || || ||||| | Sbjct 1447672 GACCAATTCCACCAGCAGTCTTGGAAATCATAGCACAGGTCTTGAGAGTATCGTAGATAC 1447613 Query 63604 CTTCTATGCTATCATCGATCATGT----TAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659 | || ||||| || || |||||| ||| || || ||| || | | ||| || Sbjct 1447612 CGTCAATGCTGTCCTCTTTCATGTCCACCAAGAAGCAAGAAGCAAG-CTGAGGCTGAGGA 1447554 Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719 |||| |||| || || || || ||||||||||| || || | || | || | | Sbjct 1447553 GTAG---CCGCGTTGAACAAAGTGGGAGAAGCGTGAGTGAAGTACTTCTGGGACATCAAG 1447497 Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATC-CCATTGATGAATTCCTACTGCGACACGCAT 63778 | || ||||||||||| || ||||| || | |||||||| || || || ||||| Sbjct 1447496 TGATATGTCTCAATAGCCTTCTCGATATCTTCACCG-TGAATTCCAACAGCAACGCGCAT 1447438 Query 63779 TAACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63838 | | ||||| || | || ||| ||| ||| || | | ||| || || Sbjct 1447437 CAGGAGATGCTGGGGCCGCTCGGCAACGTTGCCGTTGATACGGAGAAGGTATGAACGCTC 1447378 Query 63839 CAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAA 63896 || ||| || || || || ||||||| ||||| || || ||||| | ||| | || Sbjct 1447377 CAGAGTCTTGAATCCGAAGAAGTTGTAGTTGAAA--TCACGGTCGTAGACAATGGCGGAG 1447320 Query 63897 TTGAGCT 63903 ||||||| Sbjct 1447319 TTGAGCT 1447313 >seq4 Length=3320884 Score = 107 bits (118), Expect = 2e-18 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| | ||| || || ||| |||||| |||||||| | | || | ||||| || Sbjct 1737001 AACAGAAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAG 1737060 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || |||||||| ||||||||||| || ||||| || ||||| ||||| || || Sbjct 1737061 AAGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCA 1737120 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGC 33724 || ||||| || || || || ||||||||||| Sbjct 1737121 GAGAAGAAAATACCCTCGACGGCAGCAAAGGC 1737152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817261473040