Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq4 93.3 4e-14 seq3 91.5 1e-13 >seq4 Length=3320884 Score = 93.3 bits (102), Expect = 4e-14 Identities = 300/459 (65%), Gaps = 15/459 (3%) Strand=Plus/Minus Query 52609 ACTTTTGCCGAACGTCTGGTCGCGTTTGCTATAGTGGAAGGTGTGtttttttCGGGTAGT 52668 ||||| || | || ||||| || |||||| || || ||| | || || || || Sbjct 1737173 ACTTTCGCTCAGCGCCTGGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCC 1737114 Query 52669 TTTGCGGCAATATTTTACATCAA-AACCTTGGGCATAATGCCCGGCCTCACGTTTAGCAA 52727 || || | || || | |||| || | ||| | | ||||||||||| || || ||| Sbjct 1737113 TTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCC-TCATGCCCGGCCTGACCTTCTCCAA 1737055 Query 52728 CGAGTTGATATCGCGCGACGAAGGAATGCACACAGATTTTGCGTGT-TTGTATTATAATA 52786 |||| |||| || || ||||| || ||||||| || ||||| ||| || | || | Sbjct 1737054 CGAGCTGATCTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGTCTTCTGTTCT---- 1736999 Query 52787 CGCGCGTTAAAGAAAAATTGTCATATGAAAAAATT---CTAG-ACATGTTTAAAGAGGCC 52842 | | | | ||| || | | | || | | | || || || || ||||| Sbjct 1736998 CCCACCT----GAACAACCGCCCTTCCAAGCAGGTTGTCGAGGACGTGATTGTCGAGGCT 1736943 Query 52843 GTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGCATGAAC 52902 |||| || || | ||||| | ||||| ||| | || | | ||||| |||||| Sbjct 1736942 GTCGGTATCGAGCAGGAGTTCCTGACGGATGCTCTGCCGTGCGCTCTTTTGGGAATGAAC 1736883 Query 52903 GCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAGCTCGGT 52962 | | |||||||| |||||||||||||||| || ||| | || || | ||||| Sbjct 1736882 TCCAAGCTGATGTGCCAGTACATCGAGTTTGTGGCTGACCGTCTCCTGGTTGCTCTCGGC 1736823 Query 52963 CAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCGCTCGAG 53022 | ||| ||||| || || |||||||| || ||| | ||| || || | Sbjct 1736822 AACAAGAAGTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCCATCTCACTGGCT 1736763 Query 53023 GGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||||| || ||||| ||||||| ||||||||||| ||| Sbjct 1736762 GGCAAGACCAACTTCTTCGAGAAGCGTGTGGGCGACTAC 1736724 >seq3 Length=3399684 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597 || || || | ||| | || | ||||| || || || ||||||||||| |||||| Sbjct 1441885 CCACCACGGAGACGGAGCACCAGGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCGGAG 1441944 Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657 | |||| ||| |||||||| || || || |||||||||| || || ||||| || Sbjct 1441945 AGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGA 1442004 Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717 || || || ||||| ||| || || | | || | || ||| | | ||||||| Sbjct 1442005 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCGCTAGACTCCACC 1442064 Query 139718 TCAACGGTCACCGTCTTGCCGGTCA 139742 |||| ||| | ||||||||||||| Sbjct 1442065 TCAAGGGTGATGGTCTTGCCGGTCA 1442089 Score = 89.7 bits (98), Expect = 5e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 ||| || || | ||| | || ||||| | ||||| || || || ||||| |||||| Sbjct 1442223 GCCACCACGAAGACGGAGCACCAAGTGGAGAGTAGATTCCTTCTGGATGTTGTAATCGGA 1442282 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | ||| |||||||| || || || |||||||||| || || ||||| || Sbjct 1442283 AAGAGTACGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGG 1442342 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || || || ||||| ||| || || | | || | |||||| ||| |||||| Sbjct 1442343 AATACCCTCCTTGTCCTGGATCTTCGACTTGACGTTGTCGATGGTGTCGCTGGACTCCAC 1442402 Query 139717 CTCAACGGTCACCGTCTTGCCGGT 139740 ||||| ||| | ||||||||||| Sbjct 1442403 CTCAAGGGTGATAGTCTTGCCGGT 1442426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063733365600