Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq6 131 2e-25 seq4 98.7 1e-15 >seq6 Length=1791946 Score = 131 bits (144), Expect = 2e-25 Identities = 684/1076 (64%), Gaps = 32/1076 (3%) Strand=Plus/Minus Query 71778 GATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAA 71837 |||||| || || || | || || ||||| ||||| || |||||||| || || || || Sbjct 1448193 GATGGTACCCAAGTTCTTCTGGTTGCTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAA 1448134 Query 71838 CGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA 71896 || |||| || ||| |||||| || | ||| || | ||||| | || ||||||| | Sbjct 1448133 GGGGTTACCGGTCTCAGTCTGAGCCTCGAGAATGGCGTACCAGA-GCTTCTGAGCCTTGA 1448075 Query 71897 TTATATT-CTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCT 71955 | | || | | | || || | || || | || | |||||||| || Sbjct 1448074 TGGTCTTGCGACCACGGCCTTCCT-TCTCATAGCGCTCGTACAGAGCATCGAACTCATCA 1448016 Query 71956 CCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCA 72015 || || | | | || |||||| ||||| || || | || | ||| || || | Sbjct 1448015 CCGTAAACGTCAGCCAAGCCAGGAGCCTCATTGGGGCAGAACAGAGTCCAGTCGCCGTTG 1447956 Query 72016 TCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTT 72075 | | || || |||||||||||||| || |||| || || || || || | | Sbjct 1447955 GCCTCGACACGCTTCATAAAGAGATCGGGTGTCCAGAGGGCGTAGAACAGGTCACGAGCA 1447896 Query 72076 CTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGC 72135 | | |||||| || || ||||| |||||||||||| | | | || | ||| Sbjct 1447895 CGAATCTCCTCCTTGCCGTGGTTCTTGCGGAGATCGAGGAACTCGAAGACGTCGGCGTGC 1447836 Query 72136 CACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTAT 72195 || || || | ||| ||||| | | || || || ||||| || ||||| || | ||| Sbjct 1447835 CAGGGCTCGAGGTAGATGGCGAACGCACCAGGACGCTTGTTACCACCCTGGTCAACGTAG 1447776 Query 72196 CTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTC 72255 | || ||||| || | |||| | ||| || | ||| || ||||| | ||||||||| Sbjct 1447775 CGGGCAGTGTTGTTGAACACTCGGAGCATGGGCACAATGCCGTTGGAGGAACCATTGGTT 1447716 Query 72256 CCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTG 72313 || || || ||| |||||||||| || |||| ||||| ||||| || | Sbjct 1447715 CCACCAATGTAAGAGCCAGTGGCACGAATGCGGTGAACATTG--AGACCAATTCCACCAG 1447658 Query 72314 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCAT 72373 | | || || || | || || || | ||||| ||||| || || || || || | Sbjct 1447657 CAGTCTTGGAAATCATAGCACAGGTCTTGAGAGTATCGTAGATACCGTCAATGCTGTCCT 1447598 Query 72374 CCATCATGT----TAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTA 72429 | |||||| ||| || || ||| || | | ||| || ||| |||| || Sbjct 1447597 CTTTCATGTCCACCAAGAAGCAAGAAGCAAG-CTGAGGCTGAGGAGTAG---CCGCGTTG 1447542 Query 72430 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA 72489 || || || ||||||||||| || || | || | |||| | | || ||||||||| Sbjct 1447541 AACAAAGTGGGAGAAGCGTGAGTGAAGTACTTCTGGGACATCAAGTGATATGTCTCAATA 1447482 Query 72490 GCTGATTCTATATC-CCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGG 72548 || || ||||| || | || ||||| || || || ||||| | | |||||| || Sbjct 1447481 GCCTTCTCGATATCTTCACCG-TGAATTCCAACAGCAACGCGCATCAGGAGATGCTGGGG 1447423 Query 72549 TCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACC 72608 | || | | ||| || || | | ||| || |||| ||| || || || Sbjct 1447422 CCGCTCGGCAACGTTGCCGTTGATACGGAGAAGGTATGAACGCTCCAGAGTCTTGAATCC 1447363 Query 72609 AAAATAGTTGTA--TGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTA 72666 || ||||||| ||||| || || ||||| | ||| | || ||||| | || | Sbjct 1447362 GAAGAAGTTGTAGTTGAAA--TCACGGTCGTAGACAATGGCGGAGTTGAGCTCCTCGGCA 1447305 Query 72667 TATTTGTTAACTATATCCATGGTGATAC-----TTGAAATAATCGGAGAATGTTTCCCAT 72721 | || | ||||| || || |||| |||| || || || | | | || | Sbjct 1447304 TGCTTCATCACTATCTC----GT-ATACATCCTTTGAGATCATAGGGGCAGGCTTGTTGT 1447250 Query 72722 TTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTT 72781 |||| || || ||||||| | | | || || || || || | || || || | Sbjct 1447249 TTTTGGGGTTGACATAGTGGTAGAGGTCGTCGATGACCATGGAGAACTGCTTCTTCGTCT 1447190 Query 72782 CCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATGT 72837 |||||| ||||| || || || || | || || | |||||| || || || ||| Sbjct 1447189 GCTTGTGGAGATTGGAAACAGCGATACGAGCTGCCAAAATGGCGTAGTCAGGGTGT 1447134 >seq4 Length=3320884 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| | ||| || || ||| |||||| ||||| || | | || | |||||||| Sbjct 1737001 AACAGAAGACAGGCAAAGTCGGTGTGCAGGCCCTCGTCACGAGAGATCAGCTCGTTGGAG 1737060 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || || || |||||||| ||||||||||| || ||||| || || || || || || ||| Sbjct 1737061 AAGGTCAGGCCGGGCATGAGGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCA 1737120 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 || ||||| || || || || || |||||||| Sbjct 1737121 GAGAAGAAAATACCCTCGACGGCAGCAAAGGC 1737152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138839262680