Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq4 172 8e-38 seq6 132 7e-26 >seq4 Length=3320884 Score = 172 bits (190), Expect = 8e-38 Identities = 305/436 (70%), Gaps = 23/436 (5%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 |||||||| || || ||||| ||||| || ||||| || || || || ||||||| Sbjct 1737158 CTGGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTCGCCTCCATCTTC 1737099 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 |||||||||||||| || ||||||||||| ||||| | |||||| | || ||||| Sbjct 1737098 TGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGT 1737039 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT-ATCTGCGTCCCG 125604 ||||||||||| ||| ||||||||| ||| ||||| || || || | | | ||| Sbjct 1737038 GACGAGGGCCTGCACACCGACTTTGCCTGTCTTCTGTTCTCCCACCTGAACAACCGCCC- 1736980 Query 125605 AGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAAC 125664 | | | ||| | || ||| | | ||||| ||| || || | || || | Sbjct 1736979 --TTC-CAAGCAG-GTTGTCGAGGACGT---GATTGT---CGAGGCTGTCGGTATCGAGC 1736930 Query 125665 AAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGT 125724 | ||||| || || || | || ||| | | | || ||||||| |||||| |||| Sbjct 1736929 AGGAGTTCCTGACGGATGCTCTGCCGTGCGCTCTTTTGGGAATGAACTCCAAGCTGATGT 1736870 Query 125725 GCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTG--ATTGGCCGCAAGA- 125781 || ||||||| ||||||||||| || ||||| ||| |||| | ||| ||||| Sbjct 1736869 GCCAGTACATCGAGTTTGTGGCTGACCGTCTCCTG-----GTTGCTCTCGGCAACAAGAA 1736815 Query 125782 --TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGAC 125839 |||||||||| || ||||| || |||||| ||| ||||| | || ||||| Sbjct 1736814 GTACTACAACGCCACCAACCCCTTCGACTTCATGGAGTCCATCTCACTGGCTGGCAAGAC 1736755 Query 125840 CAACTTTTTCGAGAAG 125855 |||||| ||||||||| Sbjct 1736754 CAACTTCTTCGAGAAG 1736739 >seq6 Length=1791946 Score = 132 bits (146), Expect = 7e-26 Identities = 333/498 (67%), Gaps = 6/498 (1%) Strand=Plus/Plus Query 96825 GGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACGATACGTTACACAGGGCGG 96883 ||| | ||||| |||||| || ||| ||| || || | || |||||| ||||| || Sbjct 1447735 GGCATTGTGCCCATGCTCCGAGTGTTCAACAACACTGCC-CGCTACGTTGACCAGGGTGG 1447793 Query 96884 CAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGACGTTTTTGA 96943 || || || || || || | ||| ||||| | || || |||||||| ||||| || || Sbjct 1447794 TAACAAGCGTCCTGGTGCGTTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTCGA 1447853 Query 96944 CTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGACTTGTTTTA 97003 || |||| | ||||| ||| ||| || ||| || || | ||| |||| || Sbjct 1447854 GTTCCTCGATCTCCGCAAGAACCACGGCAAGGAGGAGATTCGTGCTCGTGACCTGTTCTA 1447913 Query 97004 TGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTACTGGAGCCT 97063 || |||||| || ||| | || |||||||| ||| | | | ||| |||||| || Sbjct 1447914 CGCCCTCTGGACACCCGATCTCTTTATGAAGCGTGTCGAGGCCAACGGCGACTGGACTCT 1447973 Query 97064 AATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTTGAGGCCAA 97123 | |||||| | | | || || || | || | || || ||||| || || Sbjct 1447974 GTTCTGCCCCAATGAGGCTCCTGGCTTGGCTGACGTTTACGGTGATGAGTTCGATGCTCT 1448033 Query 97124 GTACACGGCCTACGAGCAAGAGGGCCGATA-CGTGAGACGAGTCGATGCACGAGAA-CTG 97181 |||| | ||| ||| | || ||||| || |||| | || | || | |||| || Sbjct 1448034 GTACGAGCGCTATGAGAAGGAAGGCCGTGGTCGCAAGACCA-TCAAGGCTC-AGAAGCTC 1448091 Query 97182 TGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCTACAAGGAT 97241 ||| | ||||| | ||||||| ||||| || | || | ||| |||||||||||| Sbjct 1448092 TGGTACGCCATTCTCGAGGCTCAGACTGAGACCGGTAACCCCTTCATGCTCTACAAGGAT 1448151 Query 97242 ACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCAATCTGTGC 97301 | || || |||||||| ||||||| |||||| ||||||| |||||| Sbjct 1448152 GCTTGCAACAAGAAGAGCAACCAGAAGAACTTGGGTACCATCCGCAGCTCCAACCTGTGC 1448211 Query 97302 ACGGAAATTGTAGAGTAC 97319 ||||| ||||| |||||| Sbjct 1448212 ACGGAGATTGTCGAGTAC 1448229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058801680680