Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 1e-19
>seq3
Length=3399684
Score = 113 bits (124), Expect = 1e-19
Identities = 137/187 (73%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| || ||||| || || || || ||||| | |||||| || || || || ||
Sbjct 1441915 GTGGATTCCTTTTGAATGTTGTAATCGGAGAGAGTGCGACCGTCCTCGAGCTGCTTGCCG 1441974
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | |||||| || || || || || || || ||||| ||||| | ||
Sbjct 1441975 GCGAAGATCAGACGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTCGACTTG 1442034
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||||||||||| || ||||| || || || ||||| || || || ||
Sbjct 1442035 ACATTGTCGATGGTATCGCTAGACTCCACCTCAAGGGTGATGGTCTTGCCGGTCAGGGTC 1442094
Query 104543 TTTACAA 104549
|| ||||
Sbjct 1442095 TTGACAA 1442101
Score = 111 bits (122), Expect = 4e-19
Identities = 145/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| |||||||| ||||| || ||||| || || || | || || || || || || |||
Sbjct 1441687 GTGGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTACGCCCATCCTCAAGCTGCTTGCCA 1441746
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|||||||| || | ||| || || || || ||||| || ||||| |||||| ||||| ||
Sbjct 1441747 GCAAAAATCAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTATCTTGAATC-TTGCTCTT 1441805
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || | ||| || || | ||| || ||||| || || || ||
Sbjct 1441806 CACGTTGTCAATGGTGTCTGAGGATTCAACTTCCAATGTGATGGTCTTTCCGGTGAGAGT 1441865
Query 104542 TTTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 1441866 CTTGACAAAGATCTGCAT 1441883
Score = 98.7 bits (108), Expect = 2e-15
Identities = 142/198 (72%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| || ||||| || || ||||| || || || | || || || || || || |||
Sbjct 1441459 GTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGCCCATCCTCAAGCTGCTTACCA 1441518
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TT 104481
|| || || || | ||| || |||||||| || || || || ||||||||| ||||| ||
Sbjct 1441519 GCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATC-TTGCTCTT 1441577
Query 104482 TACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
||||| || | || || | || ||||| | ||| || ||||| || || || ||
Sbjct 1441578 CACATTGTCGATTGTGTCTGAGGACTCCACCTCCAATGTGATCGTCTTTCCGGTGAGAGT 1441637
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 1441638 CTTGACGAAAATCTGCAT 1441655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397765651444
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |