Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6 140 2e-28 seq3 86.0 4e-12 >seq6 Length=1791946 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2894 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2953 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2954 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2988 >seq3 Length=3399684 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | || |||||||||||| |||||||| |||||| || || ||||| || ||| Sbjct 1441429 CCACCGCGCAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 1441488 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || || | || || || || || || || || || || || | ||| Sbjct 1441489 AGCGTGCGCCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 1441548 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | || || |||||| ||| || ||||||||| | || || ||| || || Sbjct 1441549 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATTGTGTCTGAGGACTCCACC 1441608 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || ||||| || || || || || | || || ||||| |||||||| Sbjct 1441609 TCCAATGTGATCGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 1441655 Score = 86.0 bits (94), Expect = 4e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | ||||| ||||||||| ||||||||||| |||||||| | Sbjct 1441883 TACCACCACGGAGACGGAGCACCAGGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCGG 1441942 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || |||| || | || || ||||| || || || || ||||| |||| || Sbjct 1441943 AGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGG 1442002 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || |||||| || || ||| ||||| | || ||||| | | || | Sbjct 1442003 GAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCGCTAGACTCCA 1442062 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305 | || | || || || || || |||| ||| || || Sbjct 1442063 CCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 1442099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947024466733