Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq6 140 2e-28
seq3 86.0 4e-12
>seq6
Length=1791946
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2894 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2953
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2954 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2988
>seq3
Length=3399684
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150
||||| | || |||||||||||| |||||||| |||||| || || ||||| || |||
Sbjct 1441429 CCACCGCGCAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGAC 1441488
Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210
| || | || || | || || || || || || || || || || || | |||
Sbjct 1441489 AGCGTGCGCCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGG 1441548
Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270
| || || |||||| ||| || ||||||||| | || || ||| || ||
Sbjct 1441549 ATACCCTCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATTGTGTCTGAGGACTCCACC 1441608
Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| ||||| || || || || || | || || ||||| ||||||||
Sbjct 1441609 TCCAATGTGATCGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 1441655
Score = 86.0 bits (94), Expect = 4e-12
Identities = 149/217 (69%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||||| ||||||||| ||||||||||| |||||||| |
Sbjct 1441883 TACCACCACGGAGACGGAGCACCAGGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCGG 1441942
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | | || |||| || | || || ||||| || || || || ||||| |||| ||
Sbjct 1441943 AGAGAGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGG 1442002
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | || || |||||| || || ||| ||||| | || ||||| | | || |
Sbjct 1442003 GAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCGCTAGACTCCA 1442062
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCAC 38305
| || | || || || || || |||| ||| || ||
Sbjct 1442063 CCTCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTGAC 1442099
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334947024466733
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |