Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 3e-21
>seq3
Length=3399684
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || ||||| |||||| | ||||| || |||||||| | ||||| || || ||
Sbjct 1441883 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACATTGGAAGTTGAATCCTCA 1441824
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| || || || || || || ||||| || |||||
Sbjct 1441823 GACACCATTGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAG 1441764
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||||| | |||||||| ||||| || | || |||| || || | ||| |||||
Sbjct 1441763 CAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACACTTTCCGACTACAAC 1441704
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210
||||||||||||||||| || || || |||||
Sbjct 1441703 ATTCAAAAAGAATCCACTCTCCACTTGGTGCT 1441672
Score = 111 bits (122), Expect = 1e-19
Identities = 148/204 (73%), Gaps = 4/204 (2%)
Strand=Plus/Minus
Query 25009 TTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCG 25068
|||| ||||| ||||||| || ||||||| | || |||||||| || || ||||
Sbjct 1442101 TTGTCAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCTAGCGATACCATCG 1442042
Query 25069 AGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGAT 25126
| || || ||| || ||| ||||| || || ||||| || ||||||||||| |
Sbjct 1442041 A--CAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAACAGCGTCT 1441984
Query 25127 TATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
|| || |||||||| || | || || | ||||||| | ||||||||| ||||||||
Sbjct 1441983 GATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGATTACAACATTCAAAA 1441924
Query 25187 AGAATCCACGCTACATTTAGTGCT 25210
|||||||| || || | |||||
Sbjct 1441923 GGAATCCACTCTTCACCTGGTGCT 1441900
Score = 82.4 bits (90), Expect = 7e-11
Identities = 131/188 (70%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAA 25082
||||| || | ||||| | || |||||||| ||||| ||||| | |||
Sbjct 1442426 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCCAGCGACACCATCGACAACGTCAAGTCG 1442367
Query 25083 AAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAA 25142
|| ||| ||||| || || ||||| || ||||||||||| | || || ||||||||
Sbjct 1442366 AAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAACAGCGTCTGATCTTCGCCGGCAAG 1442307
Query 25143 CAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACAT 25202
|| | || || | ||| ||| | ||||||||| || || || ||||| || || ||
Sbjct 1442306 CAGCTCGAGGACGGTCGTACTCTTTCCGATTACAACATCCAGAAGGAATCTACTCTCCAC 1442247
Query 25203 TTAGTGCT 25210
|| |||||
Sbjct 1442246 TTGGTGCT 1442239
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327772909045
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |