Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 152 1e-31 seq1 107 4e-18 >seq4 Length=3320884 Score = 152 bits (168), Expect = 1e-31 Identities = 279/406 (69%), Gaps = 16/406 (4%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 1736743 TCGAAGAAGTTGGTCTTGCCAGCCAGTGAGATGGACTCCATGAAGTCGAAGGGGTTGGTG 1736802 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || | || ||||| ||||||||||| | Sbjct 1736803 GCGTTGTAGTACTTCTTGTTGCCGAGAGCAACCAGGAGACGGTCAGCCACAAACTCGATG 1736862 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| | |||||| | |||||||| || | | | || || | || || | | Sbjct 1736863 TACTGGCACATCAGCTTGGAGTTCATTCCCAAAAGAGCGCACGGCAGAGCATCCGTCAGG 1736922 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTC------ACCTG--TGCCA 251794 || |||| ||| | | || | |||| ||||| | | | ||||| || | Sbjct 1736923 AACTCCTGCTCGATACCGACAG---CCTCGACAATCACGTCCTCGACAACCTGCTTGGAA 1736979 Query 251795 GAGACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCT 251854 | | | ||||| ||| | ||| |||| || | |||| | |||||| |||| Sbjct 1736980 GGG--CGGTTGTT---CAGGTGGGAGAACAGAAGACAGGCAAAGTCGGTGTGCAGGCCCT 1737034 Query 251855 CGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGA 251914 |||| ||| ||| | ||||||||| | |||||| ||||| | ||||| ||| ||| Sbjct 1737035 CGTCACGAGAGATCAGCTCGTTGGAGAAGGTCAGGCCGGGCATGAGGCCACGCTTCTTGA 1737094 Query 251915 GCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGAC 251960 |||||||||| | | ||||| |||||||| | | ||||||||| Sbjct 1737095 GCCAGAAGATGGAGGCGAAGGAGCCAGAGAAGAAAATACCCTCGAC 1737140 >seq1 Length=5861214 Score = 107 bits (118), Expect = 4e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||| || || || |||| ||||||||||| ||| Sbjct 3707286 GGTGAGGACCTGTGCAACTGCACCTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAAC 3707227 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| |||||||||| | || || |||||| |||| ||||| || | Sbjct 3707226 CAGACCCACCTGCGTCTCAAGCGTGGTCAGCGTTACGGTCTCCTCGGACCCAACGGTTCC 3707167 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || |||| ||| || ||||| ||||| |||| ||||| || || || || || Sbjct 3707166 GGCAAGACCACCCTCATGCGTGCCATCAACAACGAGCAGCTTGAGGGTTTCCCCAAGAAG 3707107 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGAC 279563 |||||| | ||| || || || ||||||||| | ||| Sbjct 3707106 GATGAGGTCAAGACTGTCTACGTTGAGCACGACCTTGAC 3707068 Score = 104 bits (114), Expect = 5e-17 Identities = 434/669 (65%), Gaps = 37/669 (6%) Strand=Plus/Minus Query 279705 CTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGAT 279764 || || |||||||||||||||||||| || || || ||| || | | ||||| Sbjct 3706920 CTCTCCGGTGGTTGGAAGATGAAGCTCGCTCTGTGCCGTGCCGTTTTCGAGAACCCCGAT 3706861 Query 279765 GTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTG 279824 |||| || || || ||||| ||||||||| ||||| || ||||| | ||||| | | Sbjct 3706860 ATCCTGCTCCTCGACGAGCCCACCAACCACTTGGACGTCAAGAACGTTGAGTGGCTCGAG 3706801 Query 279825 TCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGACTCTGGCTTC 279884 |||||| | |||| || ||||| |||| ||||| ||||||||||||||| Sbjct 3706800 AACTACCTCA--AGTCCTCTCCTTGCA-CTTCCATCATGGTCTCCCACGACTCTGGCTTC 3706744 Query 279885 CTAGATGCCGTGTGCT-CTGC-CATCATTCACTATGAGC---AAAATCTGAAGCTCTCCA 279939 | || |||||| | | || | | ||||||| |||| || ||||||| | Sbjct 3706743 TTGGA--CCGTGTCATCCAGCACGTTGTTCACTACGAGCGCTTCAAGCTGAAGCGTT--- 3706689 Query 279940 AGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCG----CCCTGAGGCGGCCGCCTAC 279995 || || | |||||| | ||||| ||||| |||| | | | | ||||| Sbjct 3706688 ---ACCGTGGTACCCTGTCCGAGTTCGT---CAAGCGTGTCCCCTCTGCCCG-CTCCTAC 3706636 Query 279996 TATGACCTGAAGGACGCCACCGCCA---AGTGGGAATTCCCTGAGCCAGGGTTTCTGGAG 280052 || || || | ||| ||| | ||| | ||||| ||||| || || || ||| Sbjct 3706635 TACGAGCT---CGGTGCCTCCGAGATGGAGTTCAAGTTCCCCGAGCCCGGTTTCCTCGAG 3706579 Query 280053 GGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTGCTTATCCC 280112 || ||| | ||| || || || || | | | ||||| || ||| Sbjct 3706578 GGTGTCAAGACCAAGTCCAAGGCCATTATCCGTGTCAGCAACATGTCCTTCCAGTACCCC 3706519 Query 280113 AAT-GGCCCCA---ACATCTTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACGGAT 280168 | ||||| || ||| || | | || ||||| ||| | ||| || || Sbjct 3706518 GGTACTCCCCAGCCCCAGATTC-GCGACATTACCTTCCAGGTCTCTCTTGGCTCTCGTAT 3706460 Query 280169 TGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGA 280228 || |||||||| ||||| ||||| || |||||||| || |||| ||||||||||| || Sbjct 3706459 TGCCGTCATTGGTCCCAACGGTGCTGGCAAGTCTACTCTTGTCAACGTCCTGACTGGTGA 3706400 Query 280229 GACCCA-GGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGTCG 280287 || | |||| || || | |||| ||||| || || || ||| || Sbjct 3706399 -ACTTATCCCCACCTCCGGTGATGTCTACCAGCACGAGAACATCCGTATCGCCTACATCA 3706341 Query 280288 CTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTC 280347 |||||||||||| |||||||| |||||||| ||| |||||| | | ||||| | Sbjct 3706340 AGCAGCACGCTTTCGCTCACATCGATAACCACCTCGACTCTACTCCTTCCGAGTACATCC 3706281 Query 280348 AGTGGCGCT 280356 ||||||||| Sbjct 3706280 AGTGGCGCT 3706272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836233726163