Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq1 105 1e-17
>seq1
Length=5861214
Score = 105 bits (116), Expect = 1e-17
Identities = 248/367 (68%), Gaps = 8/367 (2%)
Strand=Plus/Minus
Query 298087 GATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACA-GC 298145
|||||| |||||||||| | | |||| ||||||||| ||| ||| | ||||| ||
Sbjct 170651 GATAGGTGTGATGAACTCGATGAGGAACTCTGGAATTTTTAGCAGACTGGGGAATTGCGC 170592
Query 298146 TATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCA 298205
| |||| |||||| || | || || || || | ||||| |||| |||||||
Sbjct 170591 T-TGGAGAAAGTTGATCAACAGTCCCTTGATATGGCTACCGTCGTGATCCTGATCGGTCA 170533
Query 298206 TGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTTGAA 298265
||||||| | || ||||| ||||| ||||| ||||| |||| | || |
Sbjct 170532 TGATCATGAGGTGCCCGTATCGAAGACCTTTGGTGTCGGTGTACTCTTTCTTGTGCTGCA 170473
Query 298266 GGCCGAGAATTTGTTTGAGCGCTGTG-ATTTCTTCGTTCTTCGTGATGCTTG--CCACGG 298322
|||| | || | ||||| | | || ||||| | |||||| | ||| ||| | | ||
Sbjct 170472 GGCCAATAAAGTTTTTGA-TGTTTTGAATTTCCTGGTTCTTGGAGAT--TTGATCAAAGG 170416
Query 298323 ATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGAC 298382
||||||| || ||||||| || ||||| || || ||||| || || | || | |
Sbjct 170415 ATGCATCACGAACATTCAGCAGCTTTCCTCGGAGGGGGAAAACACCGAAAAGATCCGGGC 170356
Query 298383 CGACCACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGA 298442
| || || | | ||||| || || || | || || || ||||| || |||||||
Sbjct 170355 CCACGACAGCTCGTCCTGCCATGGCCAGACCCTTGGCAGAGTCACCCTCGGTGAGAATGA 170296
Query 298443 GAGTGCA 298449
|||| ||
Sbjct 170295 GAGTACA 170289
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102879392382050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |