Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq4 165 2e-35 seq6 87.8 3e-12 >seq4 Length=3320884 Score = 165 bits (182), Expect = 2e-35 Identities = 348/518 (67%), Gaps = 15/518 (3%) Strand=Plus/Minus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCA-GAGCGCTAC 25868 ||| |||||||| | ||||| ||||||||||||||||||| | || ||| |||| Sbjct 1737230 CCCTGCATCAAGCGTAAGGCCGAGTGGGCCATGAAGTGGATCTCCGACCGTGAGT-CTAC 1737172 Query 25869 GTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT 25928 || | |||| ||||| ||||||||||| || ||||| || || ||| || || || Sbjct 1737171 TTTCGCTCAGCGCCTGGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTT 1737112 Query 25929 TGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGA 25988 || ||||||||||||||||| || || ||||||||| ||| ||| |||||||| Sbjct 1737111 CGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGA 1737052 Query 25989 GCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCA 26048 ||| ||| | |||||||| || |||| || |||||||| || || | | | ||| Sbjct 1737051 GCTGATCTCTCGTGACGAGGGCCTGCACACCGACTTTGCCTGTCTTCTGTTCTC---CCA 1736995 Query 26049 CTTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGA 26107 | || | || ||||| |||| || ||| | | || |||||||| | | Sbjct 1736994 CCTGAACAACCGCCCTTC-CAAGCAGGTTGTCGAGGACGTGATTGTCGAGGCTGTCGGTA 1736936 Query 26108 TCGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGAC 26167 ||||| ||||||| | |||| |||||| || | Sbjct 1736935 TCGAGCAGGAGTTCCTGACGGATGCTCTGCCGTGCGCTCTTTTGGGAATGAACTCCAAGC 1736876 Query 26168 TCATGAGCCAATACATTGAGTATGTGGCCGACCATCTGCTG--TGCCAGCTGGGACTCGC 26225 | ||| |||| ||||| |||| |||||| |||| ||| ||| ||| || || | Sbjct 1736875 TGATGTGCCAGTACATCGAGTTTGTGGCTGACCGTCTCCTGGTTGC--TCTCGGCAACAA 1736818 Query 26226 CAGACTCTACAGTACGC--CTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGG 26283 | ||||| |||| | ||||| |||||||| ||||| ||| || ||| || Sbjct 1736817 GAAGTACTACA--ACGCCACCAACCCCTTCGACTTCATGGAGTCCATCTCACTGGCTGGC 1736760 Query 26284 AAGACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||||||| || ||| | || |||||||| || Sbjct 1736759 AAGACCAACTTCTTCGAGAAGCGTGTGGGCGACTACCA 1736722 Score = 104 bits (114), Expect = 4e-17 Identities = 163/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | ||| |||||||||||| || |||||||| Sbjct 1737635 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCCTTCTGGACCGCCGAGGAAATTGATCTC 1737576 Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594 ||||||| || ||| |||| || | || ||||| ||| | ||| | Sbjct 1737575 TCCAAGGATCTGCACGACTGGCACAACCGTCTGAACGACGATGAGCGCTACTTCATCTCT 1737516 Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| |||| ||||| || || || || || || || |||||||| ||| ||| || Sbjct 1737515 CACGTCCTGGCTTTCTTCGCCGCTTCCGACGGCATTGTCAACGAGAACCTGCTGGAGCGA 1737456 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | ||||| ||| | || ||| || ||||||||||||||||| Sbjct 1737455 TTCAGCGGTGAAGTCCAGGTCCCCGAAGCCCGCTGCTTCTACGGTTTCCAGAT 1737403 >seq6 Length=1791946 Score = 87.8 bits (96), Expect = 3e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 221155 GTACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCT 221214 ||| | ||| || ||| | || |||| || ||||||| ||||||||| || | || || Sbjct 1448802 GTAGATGTTGGAGGTGTAGGGCTCGAAGCACTCGTTGAAGCCCAGGATTTGCGAAGTACT 1448743 Query 221215 GGCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCGCA 221252 ||||||||||||||| || || || ||||||||||||| Sbjct 1448742 GGCGGTGGGCATGGGAGCGACTAGGAGACTGTTGCGCA 1448705 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844300745920