Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq6 125 7e-24
seq4 104 2e-17
seq3 93.3 4e-14
>seq6
Length=1791946
Score = 125 bits (138), Expect = 7e-24
Identities = 346/527 (66%), Gaps = 5/527 (1%)
Strand=Plus/Minus
Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940
||| ||||||||||||||| || | ||||| ||| | |||||| |||||| || |
Sbjct 1447849 AGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCAGGACGCTTGTTACCAC 1447790
Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000
||||||| || | ||| | ||||||| ||||| || | |||||| | | |||| | |
Sbjct 1447789 CCTGGTCAACGTAGCGGGCAGTGTTGTTGAACACTCGGAGCATGGGCACAATGCCGTTGG 1447730
Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060
| || ||||| | || | ||| ||| || | ||| || || | |
Sbjct 1447729 AGGAACCATTGGTTCCACCAATGTAAGAGCCAGTGGCACGAATGCGGTGAACATTGAGAC 1447670
Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCG 148119
|||| || || || || ||| || || ||| || | || |||||| |||
Sbjct 1447669 CAATTCCACCAGCAGT-CTTGGAAATCATAGCACAGGTCTTGAGAGTATCGTAGATACCG 1447611
Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179
|| |||||||| | ||| | | | | ||| || || ||| | || || | ||
Sbjct 1447610 TCAATGCTGTCCTCTTTCATGTCCACCAAGAAGCAAGAAGCAAGCTGAGGCTGAGGAGTA 1447551
Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239
|||| ||| | |||||| ||||| || || | || || ||||| | ||||
Sbjct 1447550 GCCGCGTTGAACAAAGTGGGAGAAGCGTGAGTGAAGTACTTCTGGGACATCAAGTGATAT 1447491
Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299
||||||||||| | ||||| || || |||||||| || | || |||||||| || |
Sbjct 1447490 GTCTCAATAGCCTTCTCGATATCTTCACCGTGAATTCCAACAGCAACGCGCATCAGGAGA 1447431
Query 148300 TGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTT 148359
||||| || || |||||||| | |||||| |||||| ||| | || || ||
Sbjct 1447430 TGCTGGGGCCGCTCGGCAACGTTGCCGTTGATACGGAGAAGGTATGAACGCTCCAGAGTC 1447371
Query 148360 TTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
||| | || ||| | ||||| | ||||| | ||||| | |||||
Sbjct 1447370 TTGAATCCGAAGAAGTTGTAGTTGAAATCACGGTCGTAGACAATGGC 1447324
>seq4
Length=3320884
Score = 104 bits (114), Expect = 2e-17
Identities = 329/500 (66%), Gaps = 15/500 (3%)
Strand=Plus/Minus
Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATC-GAGAGCGAGACCGCCACGCTGGCCGAGCGCAT 46834
|||||| |||||||||||||||||||| || || || | || | || ||||| |
Sbjct 1737215 AAGGCCGAGTGGGCCATGAAGTGGATCTCCGACCGTGA-GTCTACTTTCGCTCAGCGCCT 1737157
Query 46835 GGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTA 46894
|||||| || || ||||| || | || || || ||| || ||| |||| || |
Sbjct 1737156 GGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTCGCCTCCATCTTCTG 1737097
Query 46895 CATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGA 46954
| || | ||| | ||||| |||||||| ||| |||||| ||||||| || ||
Sbjct 1737096 GCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGA 1737037
Query 46955 CGAAGGACTACACACGGACTTTGCGTGTC-TCTATTACAAGACGCGCGTGAATGAGAAAT 47013
||| || || ||||| |||||||| |||| ||| || | | | ||| | ||
Sbjct 1737036 CGAGGGCCTGCACACCGACTTTGCCTGTCTTCTGTT----CTCCCACCTGA---ACAACC 1736984
Query 47014 TAAACTCGGA-CACGATCCTGAG--CATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGT 47070
|| | || | | ||| | || || ||||| || | ||||| ||||||
Sbjct 1736983 GCCCTTCCAAGCAGGTTGTCGAGGACGTGATTGTCGAGGCTGTCGGTATCGAGCAGGAGT 1736924
Query 47071 TTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAAT 47130
| | || | || ||||| ||| | |||| |||||| | || |||||| | |
Sbjct 1736923 TCCTGACGGATGCTCTGCCGTGCGCTCTTTTGGGAATGAACTCCAAGCTGATGTGCCAGT 1736864
Query 47131 ATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGAAATATTTTAAT 47189
| || ||||||||||| || ||||| |||| ||||| |||| ||| || | ||
Sbjct 1736863 ACATCGAGTTTGTGGCTGACCGTCTCCTGGTTGCTCTCGG-CAACAAGAAGTACTACAAC 1736805
Query 47190 GCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTC 47249
|| || || || || || ||| | ||| || || | ||||| ||||| || |||
Sbjct 1736804 GCCACCAACCCCTTCGACTTCATGGAGTCCATCTCACTGGCTGGCAAGACCAACTTCTTC 1736745
Query 47250 GAGAAACGAGTCGGAGAGTA 47269
||||| || || || || ||
Sbjct 1736744 GAGAAGCGTGTGGGCGACTA 1736725
>seq3
Length=3399684
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/221 (69%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| ||||| ||||| || | | ||||| || || |||||||||||| || ||
Sbjct 1441435 CGCAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 1441494
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
||| ||| || ||||| ||||| | |||| |||||||| || || ||||| || ||
Sbjct 1441495 CGCCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCC 1441554
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| || || ||| || |||| | || | || || | | |||||| || |
Sbjct 1441555 TCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATTGTGTCTGAGGACTCCACCTCCAAT 1441614
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||| || || || ||||| || | ||||||||||||
Sbjct 1441615 GTGATCGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 1441655
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476610943821480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |