Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq6 125 7e-24 seq4 104 2e-17 seq3 93.3 4e-14 >seq6 Length=1791946 Score = 125 bits (138), Expect = 7e-24 Identities = 346/527 (66%), Gaps = 5/527 (1%) Strand=Plus/Minus Query 147884 AGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGC 147940 ||| ||||||||||||||| || | ||||| ||| | |||||| |||||| || | Sbjct 1447849 AGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCAGGACGCTTGTTACCAC 1447790 Query 147941 CCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCG 148000 ||||||| || | ||| | ||||||| ||||| || | |||||| | | |||| | | Sbjct 1447789 CCTGGTCAACGTAGCGGGCAGTGTTGTTGAACACTCGGAGCATGGGCACAATGCCGTTGG 1447730 Query 148001 CAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGC 148060 | || ||||| | || | ||| ||| || | ||| || || | | Sbjct 1447729 AGGAACCATTGGTTCCACCAATGTAAGAGCCAGTGGCACGAATGCGGTGAACATTGAGAC 1447670 Query 148061 CAATGCCGCC-GCCGTACTTTGATATGGCAGCGCAATCGCCCAATGTCGTGTAGATGCCG 148119 |||| || || || || ||| || || ||| || | || |||||| ||| Sbjct 1447669 CAATTCCACCAGCAGT-CTTGGAAATCATAGCACAGGTCTTGAGAGTATCGTAGATACCG 1447611 Query 148120 TCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTT 148179 || |||||||| | ||| | | | | ||| || || ||| | || || | || Sbjct 1447610 TCAATGCTGTCCTCTTTCATGTCCACCAAGAAGCAAGAAGCAAGCTGAGGCTGAGGAGTA 1447551 Query 148180 CCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATAC 148239 |||| ||| | |||||| ||||| || || | || || ||||| | |||| Sbjct 1447550 GCCGCGTTGAACAAAGTGGGAGAAGCGTGAGTGAAGTACTTCTGGGACATCAAGTGATAT 1447491 Query 148240 GTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATG 148299 ||||||||||| | ||||| || || |||||||| || | || |||||||| || | Sbjct 1447490 GTCTCAATAGCCTTCTCGATATCTTCACCGTGAATTCCAACAGCAACGCGCATCAGGAGA 1447431 Query 148300 TGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTT 148359 ||||| || || |||||||| | |||||| |||||| ||| | || || || Sbjct 1447430 TGCTGGGGCCGCTCGGCAACGTTGCCGTTGATACGGAGAAGGTATGAACGCTCCAGAGTC 1447371 Query 148360 TTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 ||| | || ||| | ||||| | ||||| | ||||| | ||||| Sbjct 1447370 TTGAATCCGAAGAAGTTGTAGTTGAAATCACGGTCGTAGACAATGGC 1447324 >seq4 Length=3320884 Score = 104 bits (114), Expect = 2e-17 Identities = 329/500 (66%), Gaps = 15/500 (3%) Strand=Plus/Minus Query 46776 AAGGCCCAGTGGGCCATGAAGTGGATC-GAGAGCGAGACCGCCACGCTGGCCGAGCGCAT 46834 |||||| |||||||||||||||||||| || || || | || | || ||||| | Sbjct 1737215 AAGGCCGAGTGGGCCATGAAGTGGATCTCCGACCGTGA-GTCTACTTTCGCTCAGCGCCT 1737157 Query 46835 GGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTTA 46894 |||||| || || ||||| || | || || || ||| || ||| |||| || | Sbjct 1737156 GGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTGGCTCCTTCGCCTCCATCTTCTG 1737097 Query 46895 CATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGA 46954 | || | ||| | ||||| |||||||| ||| |||||| ||||||| || || Sbjct 1737096 GCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCTCCAACGAGCTGATCTCTCGTGA 1737037 Query 46955 CGAAGGACTACACACGGACTTTGCGTGTC-TCTATTACAAGACGCGCGTGAATGAGAAAT 47013 ||| || || ||||| |||||||| |||| ||| || | | | ||| | || Sbjct 1737036 CGAGGGCCTGCACACCGACTTTGCCTGTCTTCTGTT----CTCCCACCTGA---ACAACC 1736984 Query 47014 TAAACTCGGA-CACGATCCTGAG--CATGTTTAGGGAGGCGGTGAGCATCGAAAAGGAGT 47070 || | || | | ||| | || || ||||| || | ||||| |||||| Sbjct 1736983 GCCCTTCCAAGCAGGTTGTCGAGGACGTGATTGTCGAGGCTGTCGGTATCGAGCAGGAGT 1736924 Query 47071 TTTTTACTGCGGCGCTGCCCGTCGCCTTGCTGGGCATGAACGCACAGTCTATGTGCGAAT 47130 | | || | || ||||| ||| | |||| |||||| | || |||||| | | Sbjct 1736923 TCCTGACGGATGCTCTGCCGTGCGCTCTTTTGGGAATGAACTCCAAGCTGATGTGCCAGT 1736864 Query 47131 ATATTGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGACAAC-CGAAATATTTTAAT 47189 | || ||||||||||| || ||||| |||| ||||| |||| ||| || | || Sbjct 1736863 ACATCGAGTTTGTGGCTGACCGTCTCCTGGTTGCTCTCGG-CAACAAGAAGTACTACAAC 1736805 Query 47190 GCTCGTAATCCGTTTGAGTTTATGAACAACATTTCGCTCGAGGGCAAAACCAATTTTTTC 47249 || || || || || || ||| | ||| || || | ||||| ||||| || ||| Sbjct 1736804 GCCACCAACCCCTTCGACTTCATGGAGTCCATCTCACTGGCTGGCAAGACCAACTTCTTC 1736745 Query 47250 GAGAAACGAGTCGGAGAGTA 47269 ||||| || || || || || Sbjct 1736744 GAGAAGCGTGTGGGCGACTA 1736725 >seq3 Length=3399684 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| ||||| ||||| || | | ||||| || || |||||||||||| || || Sbjct 1441435 CGCAGACGCAACACCAAGTGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTG 1441494 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 ||| ||| || ||||| ||||| | |||| |||||||| || || ||||| || || Sbjct 1441495 CGCCCATCCTCAAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCC 1441554 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || || || ||| || |||| | || | || || | | |||||| || | Sbjct 1441555 TCCTTGTCCTGAATCTTGCTCTTCACATTGTCGATTGTGTCTGAGGACTCCACCTCCAAT 1441614 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | ||| || || || ||||| || | |||||||||||| Sbjct 1441615 GTGATCGTCTTTCCGGTGAGAGTCTTGACGAAAATCTGCAT 1441655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610943821480