Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq4 129 7e-25
seq2 89.7 6e-13
>seq4
Length=3320884
Score = 129 bits (142), Expect = 7e-25
Identities = 168/226 (74%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 94791
||||||| || || ||| | ||| | || ||||| ||||||||| | | | | |
Sbjct 1737235 CAGTTCCCTGCAT-CAAGCGTAAGGCCGAGTGGGCCATGAAGTGGATC--TCCGACCGTG 1737179
Query 94792 CGT-TCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
|| | |||| ||| |||| || | || ||||| || |||||||| ||||||||||
Sbjct 1737178 AGTCTACTTTCGCTCAGCGCCTGGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTG 1737119
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| |||||| | | || | |||||||||||||| || |||||||| || || |||||
Sbjct 1737118 GCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCT 1737059
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|||||||||| ||||||||||||||||| || ||| || |||||
Sbjct 1737058 CCAACGAGCTGATCTCTCGTGACGAGGGCCTGCACACCGACTTTGC 1737013
>seq2
Length=4659373
Score = 89.7 bits (98), Expect = 6e-13
Identities = 182/268 (68%), Gaps = 2/268 (1%)
Strand=Plus/Plus
Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753
|||||| | ||||||||| ||||||||||| | ||||| || || | |||||||
Sbjct 1923096 CTTTCCGATGGCATCAATTTCATCAATGAAAATAATGCAAGGGGCGTTCTTGCGAGCGTT 1923155
Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813
| | || ||||| || || || | || ||||| |||||||||||||| || | |
Sbjct 1923156 TGCGAACAGATCACGCACTCGAGACGGTCCAACACCCACAAACATCTCCACGAATTCCGA 1923215
Query 9814 GGCG-GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872
|| ||| | || ||| || || || || || ||| | || ||||| || |
Sbjct 1923216 ACCGCTAACGCT-GAAGAAAGGCACGCCGGACTCGCCAGCAGTTGCCTTTGCGAGCAGCG 1923274
Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTC 9932
||||||| ||||| || ||| | ||| | || || || || |||||||| ||| |
Sbjct 1923275 TCTTACCAGTACCAGGAGGACCAGAGAGAATAGCGCCGCGGGGGATCTTGGCACCAAGCC 1923334
Query 9933 CAAAGTATCTCTCAGGTTGCTTAAGaaa 9960
| ||| |||||| |||| ||| ||
Sbjct 1923335 TTTGGAATCGCTCAGGCTGCTGAAGGAA 1923362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583260486497320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |