Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq4 129 7e-25 seq2 89.7 6e-13 >seq4 Length=3320884 Score = 129 bits (142), Expect = 7e-25 Identities = 168/226 (74%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 94733 CAGTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGGTTTGATACAAAGTCG 94791 ||||||| || || ||| | ||| | || ||||| ||||||||| | | | | | Sbjct 1737235 CAGTTCCCTGCAT-CAAGCGTAAGGCCGAGTGGGCCATGAAGTGGATC--TCCGACCGTG 1737179 Query 94792 CGT-TCCTTT-GCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 || | |||| ||| |||| || | || ||||| || |||||||| |||||||||| Sbjct 1737178 AGTCTACTTTCGCTCAGCGCCTGGTGGCCTTTGCTGCCGTCGAGGGTATTTTCTTCTCTG 1737119 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | |||||| | | || | |||||||||||||| || |||||||| || || ||||| Sbjct 1737118 GCTCCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTGACCTTCT 1737059 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||||| ||||||||||||||||| || ||| || ||||| Sbjct 1737058 CCAACGAGCTGATCTCTCGTGACGAGGGCCTGCACACCGACTTTGC 1737013 >seq2 Length=4659373 Score = 89.7 bits (98), Expect = 6e-13 Identities = 182/268 (68%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 9694 CTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGAC 9753 |||||| | ||||||||| ||||||||||| | ||||| || || | ||||||| Sbjct 1923096 CTTTCCGATGGCATCAATTTCATCAATGAAAATAATGCAAGGGGCGTTCTTGCGAGCGTT 1923155 Query 9754 TTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGC 9813 | | || ||||| || || || | || ||||| |||||||||||||| || | | Sbjct 1923156 TGCGAACAGATCACGCACTCGAGACGGTCCAACACCCACAAACATCTCCACGAATTCCGA 1923215 Query 9814 GGCG-GAACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAG 9872 || ||| | || ||| || || || || || ||| | || ||||| || | Sbjct 1923216 ACCGCTAACGCT-GAAGAAAGGCACGCCGGACTCGCCAGCAGTTGCCTTTGCGAGCAGCG 1923274 Query 9873 TCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCCACTTC 9932 ||||||| ||||| || ||| | ||| | || || || || |||||||| ||| | Sbjct 1923275 TCTTACCAGTACCAGGAGGACCAGAGAGAATAGCGCCGCGGGGGATCTTGGCACCAAGCC 1923334 Query 9933 CAAAGTATCTCTCAGGTTGCTTAAGaaa 9960 | ||| |||||| |||| ||| || Sbjct 1923335 TTTGGAATCGCTCAGGCTGCTGAAGGAA 1923362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260486497320