Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=3399684
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 27012 ACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAA 27071
||||||||| |||| || ||||| ||||| | |||| | || || | |||||
Sbjct 1442426 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCCAGCGACACCATCGACAACGTCAAGTCG 1442367
Query 27072 AAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAA 27131
|| || || ||||| || || || || ||||| ||||||||| | || | |||||||||
Sbjct 1442366 AAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAACAGCGTCTGATCTTCGCCGGCAAG 1442307
Query 27132 CAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACAT 27191
|| | || ||| || || |||||||||||||||| || ||||| || || | ||
Sbjct 1442306 CAGCTCGAGGACGGTCGTACTCTTTCCGATTACAACATCCAGAAGGAATCTACTCTCCAC 1442247
Query 27192 TTGGTTTTGCGTTTGCGGGGTGGCAT 27217
||||| | ||| | || ||||||||
Sbjct 1442246 TTGGTGCTCCGTCTTCGTGGTGGCAT 1442221
Score = 113 bits (124), Expect = 4e-20
Identities = 157/220 (71%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 26998 TTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTG 27057
|||| || || |||||||||||| | || || ||||| ||||| | ||| | || |
Sbjct 1442101 TTGTCAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCTAGCGATACCATCG 1442042
Query 27058 AGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAA 27117
| | ||||| || || || ||||| || || || || ||||| ||||||||| | |
Sbjct 1442041 ACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAACAGCGTCTGA 1441982
Query 27118 TATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGG 27177
| | ||||||||| || | || ||| || || | ||||||||||||||||||||||
Sbjct 1441981 TCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGATTACAACATTCAAAAGG 1441922
Query 27178 AGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
| || || | || |||| | ||| | || ||||| ||
Sbjct 1441921 AATCCACTCTTCACCTGGTGCTCCGTCTCCGTGGTGGTAT 1441882
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| ||||| || ||||| ||||| ||| | || || | ||||| ||| | ||
Sbjct 1441883 ATGCAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACATTGGAAGTTGAATCCTCA 1441824
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | ||||| | || || || |||||||| || || || || || ||||| ||
Sbjct 1441823 GACACCATTGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAG 1441764
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | || ||||| || | || || | || ||||||| ||||||
Sbjct 1441763 CAGCGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACACTTTCCGACTACAAC 1441704
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||||| || || || | || ||||| | ||| |||| ||||| ||
Sbjct 1441703 ATTCAAAAAGAATCCACTCTCCACTTGGTGCTCCGTCTGCGTGGTGGTAT 1441654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434918166231360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |