Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12]
43 sequences; 30,655,132 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq3 91.5 1e-13
>seq3
Length=3399684
Score = 91.5 bits (100), Expect = 1e-13
Identities = 159/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || ||||| ||||| |||||||| | || || || ||| |
Sbjct 1441655 ATGCAGATTTTCGTCAAGACTCTCACCGGAAAGACGATCACATTGGAGGTGGAGTCCTCA 1441596
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || ||| ||||| || ||| | || || || ||
Sbjct 1441595 GACACAATCGACAATGTGAAGA-GCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCA 1441537
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| | || || || || || || || || || | ||||| | ||| |||||
Sbjct 1441536 GCAGCGTCTCATCTTCGCTGGTAAGCAGCTTGAGGATGGGCGCACGCTGTCCGACTACAA 1441477
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838
||| || || ||||| || | || || || || | |||| || |||
Sbjct 1441476 CATCCAGAAGGAGTCTACTCTTCACTTGGTGTTGCGTCTGCGCGGTGGA 1441428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338009422861844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |