Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq3 114 3e-20 seq6 89.7 1e-12 >seq3 Length=3399684 Score = 114 bits (126), Expect = 3e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| || ||||||||||| |||| | || | |||||| || | Sbjct 1441449 CAAG-TGAAGAGTAGACTCCTTCTGGATGTTGTAGTCGGACAGCGTGCGCCCATCCTCAA 1441507 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || |||||||| || | ||||||||| | | ||| || ||||| || |||| Sbjct 1441508 GCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAA 1441567 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || ||| | || | ||||||| ||| || || | || || || || | Sbjct 1441568 TCTTGCTCTTCACATTGTCGATTGTGTCTGAGGACTCCACCTCCAATGTGATCGTCTTTC 1441627 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| ||||| | |||||| Sbjct 1441628 CGGTGAGAGTCTTGACGAAAATCTGCAT 1441655 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| || |||||||| |||||||| |||| | || | |||||| || | Sbjct 1441677 CAAG-TGGAGAGTGGATTCTTTTTGAATGTTGTAGTCGGAAAGTGTACGCCCATCCTCAA 1441735 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || || || || | ||||||||| | | ||||| ||||| ||||||| Sbjct 1441736 GCTGCTTGCCAGCAAAAATCAGGCGCTGCTGGTCGGGGGGAATTCCCTCCTTATCTTGAA 1441795 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || || || | || | | ||||||| || ||||| | || || || || | Sbjct 1441796 TCTTGCTCTTCACGTTGTCAATGGTGTCTGAGGATTCAACTTCCAATGTGATGGTCTTTC 1441855 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||||||||| || |||| |||||| Sbjct 1441856 CGGTGAGAGTCTTGACAAAGATCTGCAT 1441883 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| || || |||||||| || || ||||| ||||||||||||| | ||| | Sbjct 1441893 GAGACGGAGCACCAGGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCGGAGAGAGTGCG 1441952 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 || || || || || ||||||||||| || | ||| ||||| | | || || || Sbjct 1441953 ACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGACGCTGTTGGTCGGGGGGAATACCCTC 1442012 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || || || || |||||| | || | | | || | ||| || ||||| || Sbjct 1442013 CTTGTCCTGGATCTTCGACTTGACATTGTCGATGGTATCGCTAGACTCCACCTCAAGGGT 1442072 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCAC 152092 || || ||||| || || ||||| || Sbjct 1442073 GATGGTCTTGCCGGTCAGGGTCTTGAC 1442099 >seq6 Length=1791946 Score = 89.7 bits (98), Expect = 1e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 115629 TTCTATGCCATTTGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGG 115688 ||||| ||| | |||||| | ||||| ||||||||||| ||| |||| ||||| ||| Sbjct 1447909 TTCTACGCCCTCTGGACACCCGATCTCTTTATGAAGCGTGTCGAGGCCAACGGCGACTGG 1447968 Query 115689 AGCCTCTTTTGTCCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAG 115748 | || || || |||||||| || ||||| | | ||| ||||| ||| ||||| || Sbjct 1447969 ACTCTGTTCTGCCCCAATGAGGCTCCTGGCTTGGCTGACGTTTACGGTGATGAGTTCGAT 1448028 Query 115749 AATCTTTACGAAAGGTACGAGAAAGAGGG 115777 ||| ||||| | || ||||| || || Sbjct 1448029 GCTCTGTACGAGCGCTATGAGAAGGAAGG 1448057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820164316853