Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20oxalicum_20[genbank_20GCA_5F001723175.2_202016-09-12] 43 sequences; 30,655,132 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq3 154 4e-32 seq41 111 4e-19 >seq3 Length=3399684 Score = 154 bits (170), Expect = 4e-32 Identities = 158/205 (77%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||| || |||||||| ||||| |||||||| | |||||||| ||||||| Sbjct 1441652 CAGATTTTCGTCAAGACTCTCACCGGAAAGACGATCACATTGGAGGTGGAGTCCTCAGAC 1441593 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || |||||||||||||| || || |||||||| |||||||| Sbjct 1441592 ACAATCGACAATGTGAAGAGCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 1441533 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| || || ||||| || ||||| | || || |||| || ||| || Sbjct 1441532 CGTCTCATCTTCGCTGGTAAGCAGCTTGAGGATGGGCGCACGCTGTCCGACTACAACATC 1441473 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || || || |||| Sbjct 1441472 CAGAAGGAGTCTACTCTTCA-CTTG 1441449 Score = 134 bits (148), Expect = 3e-26 Identities = 141/184 (77%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || |||||||| |||||||| | ||||||||||| |||||||| Sbjct 1442426 ACCGGCAAGACTATCACCCTTGAGGTGGAGTCCAGCGACACCATCGACAACGTCAAGTCG 1442367 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || || || || || ||||| || || || ||||||||||| || Sbjct 1442366 AAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAACAGCGTCTGATCTTCGCCGGCAAG 1442307 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | |||||| ||||||| ||| |||| || ||||| || || || Sbjct 1442306 CAGCTCGAGGACGGTCGTACTCTTTCCGATTACAACATCCAGAAGGAATCTACTCTCCA- 1442248 Query 178125 CTTG 178128 |||| Sbjct 1442247 CTTG 1442244 Score = 132 bits (146), Expect = 1e-25 Identities = 153/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| ||||| || ||||| | || || ||| ||||||| Sbjct 1441880 CAGATCTTTGTCAAGACTCTCACCGGAAAGACCATCACATTGGAAGTTGAATCCTCAGAC 1441821 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || ||||| || |||||||| || || || ||||| || || |||||||| Sbjct 1441820 ACCATTGACAACGTGAAGAGCAAGATTCAAGATAAGGAGGGAATTCCCCCCGACCAGCAG 1441761 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || || || || || ||||| || ||||| | || ||| |||| || ||| | Sbjct 1441760 CGCCTGATTTTTGCTGGCAAGCAGCTTGAGGATGGGCGTACACTTTCCGACTACAACATT 1441701 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||||||||| || || || |||| Sbjct 1441700 CAAAAAGAATCCACTCTCCA-CTTG 1441677 Score = 123 bits (136), Expect = 6e-23 Identities = 148/200 (74%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 177933 GTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATC 177989 || || || || || || || || |||||||| |||||||| ||| || |||||| Sbjct 1442099 GTCAAGACCCTGACCGGCAAGACCATCACCCTTGAGGTGGAGTCTAGC---GATACCATC 1442043 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || || || || || ||||| || || || Sbjct 1442042 GACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAACAGCGTCTG 1441983 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 ||||||||||| || |||||||| || || | ||||| ||||||| ||| | ||||| Sbjct 1441982 ATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACTCTCTCCGATTACAACATTCAAAAG 1441923 Query 178110 GAATCAACACTGCATCTTGT 178129 ||||| || || || || || Sbjct 1441922 GAATCCACTCTTCACCTGGT 1441903 >seq41 Length=2485927 Score = 111 bits (122), Expect = 4e-19 Identities = 135/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 1134817 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGACGTCGAGTCGAGC---GACAC 1134761 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || |||||||| || Sbjct 1134760 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCAGACCAGCAGCG 1134701 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || ||||||||||| || ||||| || ||||| | || || ||| || ||| |||| Sbjct 1134700 CCTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 1134641 Query 178106 AAA 178108 || Sbjct 1134640 GAA 1134638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730536819342