Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq8 116 4e-21 seq3 104 3e-17 >seq8 Length=1516133 Score = 116 bits (128), Expect = 4e-21 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| || ||| ||||| || ||| |||||||| || | | || | |||||||| Sbjct 1131765 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 1131824 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 1131825 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 1131884 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAA 24279 || ||||| || || || || || |||||||||| Sbjct 1131885 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAA 1131918 >seq3 Length=2743392 Score = 104 bits (114), Expect = 3e-17 Identities = 550/871 (63%), Gaps = 22/871 (3%) Strand=Plus/Plus Query 53804 TGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTTCAATC 53863 || |||||||| ||||| || |||||||| || || ||||| || ||||||| ||| || Sbjct 1451631 TGGTTACTCTTCTTGTTGCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTC 1451690 Query 53864 TGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATCTCTTT 53923 |||| || | ||| || | ||||| ||||||| || | || | | Sbjct 1451691 TGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGC 1451748 Query 53924 TCTCTT--TCGTA--TAGTGTATACA--ATCGTTCAAACTCGTCTCCCCAAACATTGTCC 53977 ||| | ||||| | | ||| | | |||| ||||| || || | |||| || Sbjct 1451749 CCTCCTGCTCGTACTTCGCGTAGAGAGCATCG----AACTCATCACCGTAGACATCAGCC 1451804 Query 53978 AATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTC 54037 | || || || | || || | | | ||| || |||| ||| || || ||| Sbjct 1451805 AGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTC 1451864 Query 54038 ATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTT 54097 || |||||||| || |||| | ||| || || || | | | | ||||| || Sbjct 1451865 ATGAAGAGATCGGGGGTCCACAAAGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTA 1451924 Query 54098 CCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTAT 54157 || ||||| |||||||||||| | | | ||| | |||||||| |||| ||| Sbjct 1451925 CCGTGGTTCTTCCGCAGATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAG 1451984 Query 54158 ATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTA 54217 |||| | | ||||| || ||||| || ||||| || | || | || ||||| ||| Sbjct 1451985 ATGGCAAATGCACCAGGGCGCTTGTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTA 1452044 Query 54218 TAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTT 54277 | || | || ||| |||| |||||| ||||| | || ||||| || || || Sbjct 1452045 AACACACGCAGCATAGGAACAATACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAA 1452104 Query 54278 CCACTGGCACGAATA--TTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTA 54335 || | ||||||||| | |||| ||||| || || || || | || ||||| | Sbjct 1452105 CCGGTAGCACGAATACGGTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCA 1452162 Query 54336 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 54395 || || || | ||||| || || ||||| ||||| ||| | ||| | || | Sbjct 1452163 TGGCACAGGTCTTGAGAGTATCGTAAATACCCTCAATACTGTCAGCGCTCACATCAACCA 1452222 Query 54396 GAAAACAGCTAGAC---ATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAG 54452 | | ||| |||| | ||| | | ||| | ||||| || | || || || | Sbjct 1452223 GGA---AGCAAGACGCAAGCTGGGGCTGGGGAGTAGCGGCATTGAAAAGAGTGGGGGAGG 1452279 Query 54453 CGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCC 54512 |||| || || | || | || | | | ||| ||||| || || || |||||| Sbjct 1452280 CGTGGGTGAAGTACTTCTGGGACATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCT 1452339 Query 54513 ATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGT 54572 || ||||| || || |||||||| | || |||||| || | ||| | | ||| Sbjct 1452340 CGCCGTGGATTCCGACAGCAACACGCATCAGCAAGTGCTGGGGACGCTCAGCAACATTGC 1452399 Query 54573 TGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAA 54632 ||| || || | || || || | || || || || || ||||||| | Sbjct 1452400 CGTTAATGCGAAGAAGATATGAACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGA 1452459 Query 54633 AGTCTCGTTCGTAAATAATAACTGAGTTGAG 54663 |||| || ||||| | ||| | |||||||| Sbjct 1452460 AGTCACGGTCGTACACAATGGCCGAGTTGAG 1452490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721043386000