Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24]
75 sequences; 32,404,688 total letters
Query= NC_002687.1
Length=335593
Score E
Sequences producing significant alignments: (Bits) Value
seq2 95.1 3e-14
seq3 84.2 5e-11
>seq2
Length=3149758
Score = 95.1 bits (104), Expect = 3e-14
Identities = 130/180 (72%), Gaps = 4/180 (2%)
Strand=Plus/Minus
Query 254202 TGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCAG 254261
|| || || |||||| || | ||||| |||||||| |||| ||||||| ||||| |||
Sbjct 1522831 TGCCCACCATTCAAGATCATCATCCTCGACGAGGCAGACAGCATGACGCAAGACGCACAG 1522772
Query 254262 TCCGCCCTCCGCCGAACGATGGAGAC--GCACTCCGTTGTGACGCGTTTTTGCCTGGTGT 254319
||||| || ||||| ||||||||||| || || | | ||||| || || || || |
Sbjct 1522771 TCCGCTCTGCGCCGCACGATGGAGACATACAGTCGG--ATCACGCGGTTCTGTCTTGTCT 1522714
Query 254320 GCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379
| || || || || || |||| ||||| ||| ||| ||| ||| || || ||||
Sbjct 1522713 GTAATTATGTCACGCGCATTATCGAGCCGCTCGCTAGTCGATGCAGCAAATTCCGCTTCA 1522654
>seq3
Length=2743392
Score = 84.2 bits (92), Expect = 5e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 249277 TTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAG 249336
|| ||||| || |||| ||||||||||||| | || |||||||| || || |||
Sbjct 1451992 TTTGCCATCTACCTGGAGCCGTGGCACGCCGATGTCTTCGAGTTCCTCGATCTGCGGAAG 1451933
Query 249337 AACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGAC 249396
||| |||| || ||| | | || |||||||||||||||| ||||| | ||||
Sbjct 1451932 AACCACGGTAAGGAGGAGGTTCGCGCTCGTGACCTCTTCTACGCTTTGTGGACCCCCGAT 1451873
Query 249397 TTGTTCATGCGCCGCGTCAAGGCCGACGGCGATTGGACGCT 249437
| |||||| || || ||||| |||| || ||||| ||
Sbjct 1451872 CTCTTCATGAAGCGTGTTGAGGCCAACGGTGACTGGACCCT 1451832
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1073765368177600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |