Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 1e-15 seq5 82.4 8e-11 >seq8 Length=1516133 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/226 (70%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCAT-TGTTGGG 52895 |||||||||| ||| || | ||||| | || |||||| | ||| | | | || | || Sbjct 1131712 GAGGCCGTCGGCATCGAGCAGGAGTTCCTGACTGACGCTCTTCCC-TGTGGTCTGCTTGG 1131654 Query 52896 CATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCA 52955 ||||||| | | |||||||||||||||| ||||| || || ||| | |||||| || Sbjct 1131653 CATGAACTCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGTTGGTGGC 1131594 Query 52956 GCTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATC 53015 ||||| | ||| ||||| || || |||||||| || ||| | ||| || Sbjct 1131593 CCTCGGCAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTC 1131534 Query 53016 GCTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 || | ||||| || ||||| ||||||| ||||| || || ||| Sbjct 1131533 CCTGGCTGGCAAGACCAACTTCTTCGAGAAGCGTGTCGGTGACTAC 1131488 >seq5 Length=1939333 Score = 82.4 bits (90), Expect = 8e-11 Identities = 122/173 (71%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627 |||||||| || ||||||||||||||| | |||| ||||| ||||| || || Sbjct 1615291 GTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 1615232 Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687 ||| |||||| || ||||| || ||||| ||||| || || || ||| || || Sbjct 1615231 GCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTA 1615172 Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740 | | || | || ||| ||| ||| ||||||| ||| | |||||||| || Sbjct 1615171 ACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTGCCAGT 1615119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063534940000