Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 134 2e-26 seq3 125 1e-23 >seq8 Length=1516133 Score = 134 bits (148), Expect = 2e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| ||||| || ||| |||||||| || | | || || |||||||| Sbjct 1131765 AACAGCAGACAAGCGAAGTCAGTGTGGAGACCCTCATCACGAGAGATCAGCTCGTTGGAG 1131824 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| ||||||||||| || ||||| || ||||| || ||||| ||| Sbjct 1131825 AAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCA 1131884 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG---CG 50127 || |||||||| || || || |||||||||||||| || | | | | | | || Sbjct 1131885 GAGAAGAAGATACCCTCGACAGCGGCAAAGGCAACCAGACGCGAAGCGAAGGTTGACTCG 1131944 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTT 50165 | ||| | |||||||| | ||||| | ||||||||| Sbjct 1131945 CGGTCGTTGATCCACTTAAGGGCCCAGTTGGCCTTCTT 1131982 >seq3 Length=2743392 Score = 125 bits (138), Expect = 1e-23 Identities = 727/1151 (63%), Gaps = 22/1151 (2%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| || ||||| || || || || ||||||| || | || | | || ||| Sbjct 1451532 GCGAGGGAAGCCAGGTTGCAGACAGCCACCTCATCAGGGGCACTGTACTCGACAATCTCA 1451591 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| ||||| | ||| || || | || | || |||||||| ||||| || Sbjct 1451592 GTGCACAGGTTGGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAA 1451651 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | | Sbjct 1451652 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCAAGAATGGCGTAC 1451711 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATTGTGT 79850 |||| | || ||||||| || | |||| | | ||| | ||||| | | Sbjct 1451712 CAGA-GCTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCCTGCTCGTACTTCGC 1451767 Query 79851 ATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACA 79910 || | |||||||| || || | ||||| | | || || |||| || || Sbjct 1451768 GTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCTCGTTGGGGCA 1451827 Query 79911 CATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAG 79970 | | | ||| || || | ||| || || ||||| |||||||| || |||| | Sbjct 1451828 GAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGGGGGTCCACAA 1451887 Query 79971 AGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAG 80030 ||| || || || | | | | |||||| || || ||||| |||||||| Sbjct 1451888 AGCGTAGAAGAGGTCACGAGCGCGAACCTCCTCCTTACCGTGGTTCTTCCGCAGATCGAG 1451947 Query 80031 GAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTT 80090 |||| | | | ||| | |||||||| |||| ||| ||||| | | || || || || Sbjct 1451948 GAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAATGCACCAGGGCGCTT 1452007 Query 80091 GTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAAT 80150 ||| || ||||| || | || | || ||||| ||| | || | || ||| |||| ||| Sbjct 1452008 GTTACCACCCTGGTCGACATAGCGTGCAGTGTTGTTAAACACACGCAGCATAGGAACAAT 1452067 Query 80151 ACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATA--TTACTA 80208 ||| ||||| | || ||||| || || || || | ||||||||| | Sbjct 1452068 ACCGTTGGAGGAGCCGTTGGTTCCACCAATGTAAGAACCGGTAGCACGAATACGGTGGAC 1452127 Query 80209 ATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCA 80268 |||| ||||| || || || || | || ||||| | || || || | ||||| Sbjct 1452128 ATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCG 1452185 Query 80269 TAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGAC---ATTTGG 80325 || || ||||| || || ||| | ||| | || || | ||| |||| | ||| Sbjct 1452186 TAAATACCCTCAATACTGTCAGCGCTCACATCAACCAGGA---AGCAAGACGCAAGCTGG 1452242 Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385 | | ||| | ||||| || | || || || ||||| || || | || | ||| Sbjct 1452243 GGCTGGGGAGTAGCGGCATTGAAAAGAGTGGGGGAGGCGTGGGTGAAGTACTTCTGGGAC 1452302 Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445 | | | ||| |||||||| || || |||||| || ||||| || || ||| Sbjct 1452303 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGGATTCCGACAGCAACA 1452362 Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAG-TAAGA 80504 ||||| | || |||||| || | ||| | | ||| ||| | || ||| || || Sbjct 1452363 CGCATCAGCAAGTGCTGGGGACGCTCAGCAACATTG-CCGTTAATGCGAAGAAGATATGA 1452421 Query 80505 TTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAAC 80564 || | || || || || || ||||||| ||||| || ||||| | ||| | Sbjct 1452422 ACGCTCGAGGGTCTTGAATCCGAAGAAGTTGTAGTTGAAGTCACGGTCGTACACAATGGC 1452481 Query 80565 CGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATAC-TTGAAATAATCG 80623 ||||||||| | || || || |||| | | | | || | | |||| || || | Sbjct 1452482 CGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAATGTTCCTTTGAGATCATAG 1452540 Query 80624 GAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAA 80683 ||| | | || || || || || || |||| | | | ||| || || | | Sbjct 1452541 GAGCAGGCTTATTGTTCTTGGGGTTCACGTAGTGGTACAGATCGGAGATGACCATAGAGA 1452600 Query 80684 ATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCAT 80743 || | ||||| |||| |||||| || || || ||||| || | || || | ||| || | Sbjct 1452601 ATTGCTTTTTAGTTTGCTTGTGGAGGTTCGAAACGGCGATACGTGCAGCCAGAATAGCGT 1452660 Query 80744 AATCTGGATGT 80754 | || || ||| Sbjct 1452661 AGTCGGGGTGT 1452671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268126623000