Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq8 132 7e-26 seq3 125 1e-23 >seq8 Length=1516133 Score = 132 bits (146), Expect = 7e-26 Identities = 297/440 (68%), Gaps = 31/440 (7%) Strand=Plus/Minus Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 ||||| || || ||||| || ||||| |||||||| || || || || ||||||| Sbjct 1131922 CTGGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCTCTGGCTCATTCGCCTCCATCTTC 1131863 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||| |||||||| || || ||||| || || || | |||||| | || ||||| Sbjct 1131862 TGGCTGAAGAAGCGTGGCCTGATGCCTGGTCTCACTTTCTCCAACGAGCTGATCTCTCGT 1131803 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAACT--ATCTGCGTCCC 125603 || ||||| || ||| |||||| || ||| ||||| || || | | | || ||| Sbjct 1131802 GATGAGGGTCTCCACACTGACTTCGCTTGTCTGCTGTTCTCCCACATGAACCACCGCCCC 1131743 Query 125604 GAGTGCA-GATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGA 125662 || || ||| | ||| || |||| | | ||| ||||| | || || Sbjct 1131742 GACCCCAAGATG----GTTGA---GGCTATCATCGT------CGAGGCCGTCGGCATCGA 1131696 Query 125663 ACAAGAGTTTCTAACCGAATCCCTACC----GGTCAGCATGATTGGCATGAACTGCAAGC 125718 || ||||| || || || | || || |||| || |||||||||||| ||||| Sbjct 1131695 GCAGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGC----TTGGCATGAACTCCAAGC 1131640 Query 125719 TAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGCCGCA 125778 | |||||||||||||| ||||| || || || || |||| | | | ||| || Sbjct 1131639 TGATGTGCGAGTACATTGAGTTCGTCGCTGACCG---CCTGTTGGTGGCCCTCGGCAACA 1131583 Query 125779 AGA---TTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTA 125835 ||| |||||||| | || ||||| || |||||| ||| || || | || | Sbjct 1131582 AGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCA 1131523 Query 125836 AGACCAACTTTTTCGAGAAG 125855 |||||||||| ||||||||| Sbjct 1131522 AGACCAACTTCTTCGAGAAG 1131503 >seq3 Length=2743392 Score = 125 bits (138), Expect = 1e-23 Identities = 326/488 (67%), Gaps = 12/488 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | ||| ||||| |||| || |||||||| || Sbjct 1452019 CAGGGTGGTAACAAGCGCCCTGGTGCATTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 1451960 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| |||| || ||| || || |||| || || | ||| Sbjct 1451959 GTCTTCGAGTTCCTCGATCTGCGGAAGAACCACGGTAAGGAGGAGGTTCGCGCTCGTGAC 1451900 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || | ||| || ||| | ||||||||||| || | | |||||| Sbjct 1451899 CTCTTCTACGCTTTGTGGACCCCCGATCTCTTCATGAAGCGTGTTGAGGCCAACGGTG-- 1451842 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| ||| | |||||| || | | ||||||||| | ||| || || || ||| Sbjct 1451841 -ACTGGACCCTCTTCTGCCCCAACGAGGCCCCCGGTCTGGCTGATGTCTACGGTGATGAG 1451783 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || || || ||| || |||||||| |||||||| || |||| | || | || Sbjct 1451782 TTCGATGCTCTCTACGCGAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 1451724 Query 97172 ACGAGAA-CTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 | |||| || ||| | |||| || ||| ||| ||| |||||||| | || | ||| Sbjct 1451723 TC-AGAAGCTCTGGTACGCCATTCTTGA-GGCCCAGACTGAGACTGGTAACCCCTTCATG 1451666 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 |||||||||||| | || || || ||||| || |||| || || || Sbjct 1451665 CTCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGC 1451606 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||||| |||||||| || ||||| |||||| | || || ||| ||| || ||| Sbjct 1451605 TCCAACCTGTGCACTGAGATTGTCGAGTACAGTGCCCCTGATGAGGTGGCTGTCTGCAAC 1451546 Query 97350 CTGGCATC 97357 ||||| || Sbjct 1451545 CTGGCTTC 1451538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058505257000