Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq51 132 3e-26 seq1 102 5e-17 >seq51 Length=15542 Score = 132 bits (146), Expect = 3e-26 Identities = 85/93 (91%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25904 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTA 25958 |||||||||| ||||||||||||||||||||||||||||||| || |||||||||| Sbjct 1150 GCCCGTTCCCCTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 1209 Query 25959 ATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||| |||||||||||||||||||||||||||| Sbjct 1210 ATCCATTCATGCGCGTCACTAATTAGATGACGA 1242 >seq1 Length=5008156 Score = 102 bits (112), Expect = 5e-17 Identities = 197/289 (68%), Gaps = 4/289 (1%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAAACGGTA 6258 ||||| |||||||| ||| | | | || | || ||||||||||| ||||| ||||||| Sbjct 4425866 TTCTATCGCTACAAGATG--GAGAAGCTCCAGGCTAAGGTCGAGGGCAAGGGCAACGGTA 4425809 Query 6259 TTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCT 6318 |||| ||||| | |||||| || ||| || | | ||| | || || | ||| Sbjct 4425808 TTAAGACCGTTGTCGTCAACCTGAACTCAGTTGCCCAATCCCTCAGTCGGCCGCCTGCCT 4425749 Query 6319 ACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACG 6378 | | | || || || || | |||||||| || ||| | | | | | | ||| Sbjct 4425748 ATCTCATCAAGTACTTTGGATTTGAACTTGGTGCCCAGGCCAACGCTAAGCCCTCTGACG 4425689 Query 6379 AGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGACGGCT 6438 | || | ||| | ||||| || || || | ||||||| ||||| | || ||||||| Sbjct 4425688 ATCGTTGGATCATCAACGGCTCTCACGACGCCCCCAAGCTCCAGGATTACCTCGACGGCT 4425629 Query 6439 TTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 | || ||||||||||||||| | | ||| | ||||| |||||||| Sbjct 4425628 TCATCTCCAAGTTTGTGCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 4425580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946893837325