Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24]
75 sequences; 32,404,688 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq5 91.5 1e-13
seq7 84.2 2e-11
>seq5
Length=1939333
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | || ||| | ||||| ||||| ||
Sbjct 1615609 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 1615668
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||||||||| ||||| | || | ||| || || || || ||||| || |||||
Sbjct 1615669 GACACTATCGATAATGTGAAGTCCAAGATTCA-AGATAAGGAGGGCATTCCCCCCGACCA 1615727
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || || || ||||| || | ||||||| || ||| | ||| |||||
Sbjct 1615728 GCAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACTCTTTCCGACTACAA 1615787
Query 25178 TATTCAAAAAGAATCCACGCTACA 25201
||| || || || || ||||| ||
Sbjct 1615788 TATCCAGAAGGAGTCAACGCTCCA 1615811
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/193 (70%), Gaps = 4/193 (2%)
Strand=Plus/Plus
Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070
|| ||||| |||| || ||| ||||||| | || || ||||| || || |||||
Sbjct 1615393 GTCAAGACCCTGACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACCATCGA- 1615451
Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128
|| || ||| || ||| || || || || || || || ||||||||||| | |
Sbjct 1615452 -CAATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAACAGCGCTTGA 1615510
Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188
| ||||||||||| || | ||||||| || ||| | ||| ||||| || || ||||
Sbjct 1615511 TCTTTGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTTTCCGACTACAACATCCAGAAAG 1615570
Query 25189 AATCCACGCTACA 25201
|||| || || ||
Sbjct 1615571 AATCGACCCTCCA 1615583
>seq7
Length=1663411
Score = 84.2 bits (92), Expect = 2e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067
|| || ||||| |||| ||||| |||| || |||| || |||||| ||||| |||
Sbjct 873847 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 873788
Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127
|| | ||| || ||| ||||| || || ||||| |||||||||||||| |
Sbjct 873787 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 873728
Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186
|| || ||||| || || | || |||| ||||| || |||| ||||| || || ||
Sbjct 873727 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 873669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433327603911125
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |