Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 91.5 1e-13 seq7 84.2 2e-11 >seq5 Length=1939333 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || | || ||| | ||||| ||||| || Sbjct 1615609 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACTATTACACTTGAAGTCGAGTCATCC 1615668 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||||||||| ||||| | || | ||| || || || || ||||| || ||||| Sbjct 1615669 GACACTATCGATAATGTGAAGTCCAAGATTCA-AGATAAGGAGGGCATTCCCCCCGACCA 1615727 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || || ||||| || | ||||||| || ||| | ||| ||||| Sbjct 1615728 GCAGCGTCTCATCTTCGCAGGCAAGCAGCTTGAAGATGGCCGTACTCTTTCCGACTACAA 1615787 Query 25178 TATTCAAAAAGAATCCACGCTACA 25201 ||| || || || || ||||| || Sbjct 1615788 TATCCAGAAGGAGTCAACGCTCCA 1615811 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/193 (70%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 25011 GTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAG 25070 || ||||| |||| || ||| ||||||| | || || ||||| || || ||||| Sbjct 1615393 GTCAAGACCCTGACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACCATCGA- 1615451 Query 25071 TCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128 || || ||| || ||| || || || || || || || ||||||||||| | | Sbjct 1615452 -CAATGTTAAGTCGAAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAACAGCGCTTGA 1615510 Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188 | ||||||||||| || | ||||||| || ||| | ||| ||||| || || |||| Sbjct 1615511 TCTTTGCCGGCAAGCAGCTTGAAGATGGCCGTACTCTTTCCGACTACAACATCCAGAAAG 1615570 Query 25189 AATCCACGCTACA 25201 |||| || || || Sbjct 1615571 AATCGACCCTCCA 1615583 >seq7 Length=1663411 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 25008 TTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATC 25067 || || ||||| |||| ||||| |||| || |||| || |||||| ||||| ||| Sbjct 873847 TTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCATC 873788 Query 25068 GAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATT 25127 || | ||| || ||| ||||| || || ||||| |||||||||||||| | Sbjct 873787 GACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCTG 873728 Query 25128 ATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAA 25186 || || ||||| || || | || |||| ||||| || |||| ||||| || || || Sbjct 873727 ATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 873669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327603911125