Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5 107 2e-18 seq9 93.3 4e-14 seq7 86.0 5e-12 >seq5 Length=1939333 Score = 107 bits (118), Expect = 2e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || ||||| |||| ||||| || || ||| ||||||| | ||| || | || Sbjct 1615405 ACTGGAAAAACCATCACCCTTGAGGTCGAGTCCAGCGATACCATCGACAATGTTAAGTCG 1615464 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| || || ||||| ||||| || | || ||||||||||| Sbjct 1615465 AAGATCCAGGATAAGGAGGGCATCCCCCCCGACCAACAGCGCTTGATCTTTGCCGGCAAG 1615524 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 ||| | || ||| ||| || | ||||| |||||||| || |||||||| ||| Sbjct 1615525 CAGCTTGAAGATGGCCGTACTCTTTCCGACTACAACATCCAGAAAGAATCGACC 1615578 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| ||||| || || |||| || || || || | | | Sbjct 1615837 ATGCAAATCTTCGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCA 1615896 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| | |||| || || || |||||||||||||| || || || || Sbjct 1615897 GACACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 1615956 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || || || ||| | ||||| || || | || || || ||| Sbjct 1615957 CAGCGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGTACTCTTTCGGACTATAAC 1616016 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || ||||| | || | || ||||| |||| || || Sbjct 1616017 ATCCAGAAGGAGTCCACACTCCACCTGGTGTTGCGTCTGCGTGGTGG 1616063 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| || || ||| |||||| | ||| | | || Sbjct 1615119 ACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTTAAGTCG 1615178 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || |||||||| || || || || || || || | || ||||||||||| Sbjct 1615179 AAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTTGCCGGCAAG 1615238 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415 ||| | || ||| ||||||| |||||||||| |||||||| || || || || Sbjct 1615239 CAGCTTGAAGATGGCCGCACCCTCTCCGATTATAACATTCAGAAGGAGTCTAC 1615291 >seq9 Length=1465924 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 22311 AGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGA 22370 |||||||||||||||||| || || ||||| || || || || |||||||| ||| | || Sbjct 863178 AGACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGA 863237 Query 22371 GGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACC 22416 |||| |||||| | || ||||||||||| || || || || ||| Sbjct 863238 GGATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACC 863283 >seq7 Length=1663411 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286 ||| || || || | || ||||| || | || || || || || | | ||| ||| | Sbjct 873848 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGCGACACCAT 873789 Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346 ||| | |||| || || || ||||||||||| ||||| || || ||||| ||||| Sbjct 873788 CGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCGTCT 873729 Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || || ||||| || ||| | |||||| ||||||| | ||| |||||||| || || Sbjct 873728 GATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCAGAA 873669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727616342375