Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq8 159 7e-34 seq5 98.7 2e-15 seq19 91.5 3e-13 >seq8 Length=1516133 Score = 159 bits (176), Expect = 7e-34 Identities = 282/405 (70%), Gaps = 12/405 (3%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| |||| ||||| ||||||||||||||||||||| || Sbjct 1131507 TCGAAGAAGTTGGTCTTGCCAGCCAGGGAGATGGACTCCATGAAGTCGAAGGGGTTGGTA 1131566 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| | ||| | ||| || || || || | |||||| || || ||||| | Sbjct 1131567 GCGTTGTAGTACTTCTTGTTGCCGAGGGCCACCAACAGGCGGTCAGCGACGAACTCAATG 1131626 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 |||| | |||||| | ||||||||||||| || || ||| |||| || ||| | | Sbjct 1131627 TACTCGCACATCAGCTTGGAGTTCATGCCAAGCAGACCACAGGGAAGAGCGTCAGTCAGG 1131686 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACC----TGTGCCAGAGA 251798 || |||| ||| || | || ||||| | | || |||| ||| || | | | Sbjct 1131687 AACTCCTGCTCGATGCCGACGGCCTCGACGATGATAGCCTCAACCATCTTGGGGTCGGGG 1131746 Query 251799 CAGCTTGTTCTCCAGCTTTGAGTACAGGAG-CTCGCCAA-ACTGTTGGTGCAGACCCTCG 251856 | | | ||| || | ||| |||| || | || || | || ||| |||||||| Sbjct 1131747 C-GGTGGTT---CATGTGGGAGAACAGCAGACAAGCGAAGTCAGT--GTGGAGACCCTCA 1131800 Query 251857 TCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGC 251916 || ||| ||| | ||||||||| | | || |||||||||| ||||| ||| | ||| Sbjct 1131801 TCACGAGAGATCAGCTCGTTGGAGAAAGTGAGACCAGGCATCAGGCCACGCTTCTTCAGC 1131860 Query 251917 CAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACA 251961 |||||||| | | || || |||||||| | | |||||||||| Sbjct 1131861 CAGAAGATGGAGGCGAATGAGCCAGAGAAGAAGATACCCTCGACA 1131905 >seq5 Length=1939333 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 279344 AGGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAA 279403 ||||| || || || |||| |||||| || || || |||| ||||||||||| || Sbjct 1103083 AGGTGTCGACCTTTGCAACTGCACTTTCTCCCTGGCCTACGGTGCCAAGATTCTGCTGAA 1103142 Query 279404 CTCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGC 279463 | || | ||| | |||||||||| | || || |||||| |||| ||||| || | Sbjct 1103143 CCAGACTCACCTGCGCCTCAAGCGTGGTCAGCGTTACGGTCTCCTCGGCCCCAACGGTTC 1103202 Query 279464 GGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGC 279523 || |||| ||| || ||||| || || |||| ||||| || || || || || Sbjct 1103203 CGGAAAGACCACCCTCATGCGTGCTATCAACAACGAGCAGCTCGAGGGTTTCCCCAAGAA 1103262 Query 279524 ATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 |||||| | ||| || || || |||||||| ||||||| Sbjct 1103263 GGATGAGGTCAAGACCGTCTACGTCGAGCACGATCTCGACTC 1103304 >seq19 Length=514394 Score = 91.5 bits (100), Expect = 3e-13 Identities = 409/646 (63%), Gaps = 14/646 (2%) Strand=Plus/Minus Query 218440 GATGAGCGCAAGACCTGGCTGCTCGACTTCCAGCCCGGAAACCAGTTGGACCAGTCGAAG 218499 |||||||| || ||||||| | | ||||||| | | ||||||| || | Sbjct 327025 GATGAGCGTAAAGAGTGGCTGCGTCAATATAAGCCCGGCACATATCTGGACCATTCCGTG 326966 Query 218500 ACCAACATCCCCGTCCCTGACTTCATCGACAAGGAGCTCATTCTTTTC----TCGCGGTA 218555 | || ||| | | | ||||||||| ||||||||||||| || ||| | ||| Sbjct 326965 GCGAAGATCACATACACCGACTTCATCAACAAGGAGCTCATCCTGTTCAGTATGGCG--- 326909 Query 218556 TGATGTGGAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGAT 218615 ||| | ||||| ||||| ||| |||||||| | |||||| ||||| ||| | Sbjct 326908 -GATAACCAACGTTCGATTCCTTCCGTCGTGGATGGTTTGAAGCCAGGTCAGCGCAAGGT 326850 Query 218616 CCTCTTTGCCGCATTCAAGCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGG 218675 || || ||| || || ||| | || || ||||| | | || | | || Sbjct 326849 GCTTCACACCTGTTTCCGCCGCAATCTGAAGAAGGACATGAAGGTGGTTGAGCTAGCAGG 326790 Query 218676 TTATGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGT 218735 | ||||||||| ||| | | |||||| |||||||| || ||| | || || Sbjct 326789 TCATGTATCCGGAATGACAGCCTACCACCACGGTGACGCCTCCCTTCAGCAGACTATCGT 326730 Query 218736 AGGCATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCA 218795 || |||| ||| || ||| ||| ||||| || |||| || |||| ||| | Sbjct 326729 CGGTCTGGCCCAGACCTTTGTTGGCTCCAACAATATCAACTGCCTAGAGCCCAGTGGTAA 326670 Query 218796 GTTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAA 218855 |||||| ||| || ||||| ||| |||| ||| | || |||| || Sbjct 326669 TTTTGGTAGTCGACTTCAAGGTGGTGGTGATTGTGCCAGTGCACGTTACATCTACACTCG 326610 Query 218856 GTTGTCGCCCGTGACGCGCCAGGTGTTCAATCAGGCCGATGATGTGCTCCTTAAGTATCT 218915 |||| ||| | | ||| | || ||| || ||||||||| || || | ||| Sbjct 326609 CCTGTCCCCCTTTGCACGCAAAGTTTTCCATACGGCCGATGAACCTCTACTGACGTACAA 326550 Query 218916 TGAGGACGATGGTTCTTCGATTGAGCCCGAGTGGTATGTGCCTGCTATTCC---GTTTTT 218972 ||||||||||| ||||||||||||| | | | |||| | || | |||| Sbjct 326549 CGAGGACGATGGCAAGAAGATTGAGCCCGAGGTCTTTATTCCTGTCGTCCCGATGATTTT 326490 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 | || ||||| || |||||||||| || || | ||| || || || ||||| Sbjct 326489 GATC---AATGGCGCGGATGGTATCGGAACTGGTTGGAGTTCTTCTATCCCCAACTACAA 326433 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCATATCTGGCAAG 219078 ||| | || | | |||| ||||||| ||||| ||||| || Sbjct 326432 TCCTGAAGATGTTGTGAACAATCTCAAGCGCCTCATGGCTGGCCAG 326387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835812313075