Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24]
75 sequences; 32,404,688 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq7 104 2e-17
seq5 102 8e-17
>seq7
Length=1663411
Score = 104 bits (114), Expect = 2e-17
Identities = 133/181 (73%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985
|| || || ||||| |||| || ||||| ||| || ||||| ||||| ||| |||||
Sbjct 873669 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 873728
Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044
| ||||| || || || || ||||||||||||||| ||| || ||||| |||| ||
Sbjct 873729 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 873787
Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104
|| |||||| | |||||| |||| ||| | || || || ||||| || || || ||
Sbjct 873788 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 873847
Query 127105 A 127105
|
Sbjct 873848 A 873848
>seq5
Length=1939333
Score = 102 bits (112), Expect = 8e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||||||||| || | || ||||| || || || || || ||
Sbjct 1616063 CCACCACGCAGACGCAACACCAGGTGGAGTGTGGACTCCTTCTGGATGTTATAGTCCGAA 1616004
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || || || ||||| || |||||| |||| | |||||||| || |||||
Sbjct 1616003 AGAGTACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 1615944
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| |||||||||||| ||| || ||||| |||| || | |||||| | ||||| ||
Sbjct 1615943 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAAC 1615885
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | || || ||||||| ||| || || || || |||||
Sbjct 1615884 CTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1615837
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| |||| || | || | || | ||| ||||| || || |||||||| |||
Sbjct 1615835 CCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGGATATTGTAGTCGGAA 1615776
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || || ||| || ||||| || || ||| |||| | |||||||| ||||| ||
Sbjct 1615775 AGAGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGA 1615716
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| || || || ||| | | |||| ||||| | |||||||
Sbjct 1615715 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACT 1615656
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | || ||||| || || || || || |||||||||||
Sbjct 1615655 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1615609
Score = 86.0 bits (94), Expect = 6e-12
Identities = 96/127 (76%), Gaps = 1/127 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|||||||| || ||||| || |||||| | ||||| ||| || ||||| || ||
Sbjct 1615291 GTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 1615232
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||| |||||||| || ||||| ||||||||||| ||| ||| ||| |||
Sbjct 1615231 GCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTA 1615172
Query 127037 A-GTTGT 127042
| |||||
Sbjct 1615171 ACGTTGT 1615165
Score = 82.4 bits (90), Expect = 7e-11
Identities = 129/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| || ||||| || || ||||| ||| | || || ||| || ||||| || ||
Sbjct 1615577 GTCGATTCTTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGCTGCTTGCCG 1615518
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| ||||||| ||||| || ||||| || ||||||||||| ||| ||| ||| |||
Sbjct 1615517 GCAAAGATCAAGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTA 1615458
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | |||| ||| || | |||||| || | ||| | ||||| || ||||| ||
Sbjct 1615457 ACATTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTC 1615398
Query 127097 TTTAC 127101
|| ||
Sbjct 1615397 TTGAC 1615393
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500354218000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |