Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq7 104 2e-17 seq5 102 8e-17 >seq7 Length=1663411 Score = 104 bits (114), Expect = 2e-17 Identities = 133/181 (73%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 || || || ||||| |||| || ||||| ||| || ||||| ||||| ||| ||||| Sbjct 873669 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 873728 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTC 127044 | ||||| || || || || ||||||||||||||| ||| || ||||| |||| || Sbjct 873729 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTG-TC 873787 Query 127045 GACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 || |||||| | |||||| |||| ||| | || || || ||||| || || || || Sbjct 873788 GATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 873847 Query 127105 A 127105 | Sbjct 873848 A 873848 >seq5 Length=1939333 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||||||||| || | || ||||| || || || || || || Sbjct 1616063 CCACCACGCAGACGCAACACCAGGTGGAGTGTGGACTCCTTCTGGATGTTATAGTCCGAA 1616004 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || ||||| || |||||| |||| | |||||||| || ||||| Sbjct 1616003 AGAGTACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 1615944 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| ||| || ||||| |||| || | |||||| | ||||| || Sbjct 1615943 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTG-TCAATGGTGTCTGAGCTCTCAAC 1615885 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| || | || || ||||||| ||| || || || || ||||| Sbjct 1615884 CTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1615837 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || | || | || | ||| ||||| || || |||||||| ||| Sbjct 1615835 CCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGGATATTGTAGTCGGAA 1615776 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || ||| || ||||| || || ||| |||| | |||||||| ||||| || Sbjct 1615775 AGAGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGA 1615716 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||| || || || ||| | | |||| ||||| | ||||||| Sbjct 1615715 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACT 1615656 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || || ||||||||||| Sbjct 1615655 TCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1615609 Score = 86.0 bits (94), Expect = 6e-12 Identities = 96/127 (76%), Gaps = 1/127 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || ||||| || |||||| | ||||| ||| || ||||| || || Sbjct 1615291 GTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 1615232 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| |||||||| || ||||| ||||||||||| ||| ||| ||| ||| Sbjct 1615231 GCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCCTGGATCTTCGACTTA 1615172 Query 127037 A-GTTGT 127042 | ||||| Sbjct 1615171 ACGTTGT 1615165 Score = 82.4 bits (90), Expect = 7e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || || ||||| || || ||||| ||| | || || ||| || ||||| || || Sbjct 1615577 GTCGATTCTTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCTTCAAGCTGCTTGCCG 1615518 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 || ||||||| ||||| || ||||| || ||||||||||| ||| ||| ||| ||| Sbjct 1615517 GCAAAGATCAAGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCCTGGATCTTCGACTTA 1615458 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||| || | |||||| || | ||| | ||||| || ||||| || Sbjct 1615457 ACATTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTTTTTCCAGTCAGGGTC 1615398 Query 127097 TTTAC 127101 || || Sbjct 1615397 TTGAC 1615393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500354218000