Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq5 192 1e-43 seq7 127 5e-24 seq9 125 2e-23 seq3 120 7e-22 >seq5 Length=1939333 Score = 192 bits (212), Expect = 1e-43 Identities = 168/209 (80%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 210906 ACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCC 210965 || ||||| || |||||||| || ||||||||||| |||| ||| || | || || ||| Sbjct 1616045 ACCAGGTGGAGTGTGGACTCCTTCTGGATGTTATAGTCCGAAAGAGTACGCCCGTCCTCC 1615986 Query 210966 AGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGG 211025 |||||||| || ||||||||||| || || ||||||||||| | || |||||||||||| Sbjct 1615985 AGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 1615926 Query 211026 ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTT 211085 ||||| || ||||| || |||||||| ||||| ||||||||||| ||||| |||||| Sbjct 1615925 ATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAGCGTGATAGTCTTT 1615866 Query 211086 CCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || | |||||| || || | ||||| Sbjct 1615865 CCGGTCAAAGTCTTGACGAAGATTTGCAT 1615837 Score = 145 bits (160), Expect = 2e-29 Identities = 146/190 (77%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || || ||||||||||| | ||||| | |||||| Sbjct 1615306 AGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTATAATCGGAGAGGGTGCGGCCATCT 1615247 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| || ||||||||||| | || ||||| ||| Sbjct 1615246 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGGATGCCCTCCTTATCC 1615187 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| || || | |||||||| || ||||| ||| Sbjct 1615186 TGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCAACCTCAAGGGTGATGGTC 1615127 Query 211083 TTTCCCGTGA 211092 || || |||| Sbjct 1615126 TTGCCAGTGA 1615117 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || ||||| || || || | ||| || | |||||| Sbjct 1615820 AGGACGAGGTGGAGCGTTGACTCCTTCTGGATATTGTAGTCGGAAAGAGTACGGCCATCT 1615761 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||||||||||||||| || || || ||||| || |||| || ||||| || Sbjct 1615760 TCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGGAATGCCCTCCTTATCT 1615701 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| ||||| || ||||| ||||| || || || || || || || ||| Sbjct 1615700 TGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGACTTCAAGTGTAATAGTC 1615641 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || || | |||||| Sbjct 1615640 TTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1615609 Score = 136 bits (150), Expect = 9e-27 Identities = 150/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || || ||||| |||||||| || || | ||| || | |||||| Sbjct 1615592 AGGACGAGGTGGAGGGTCGATTCTTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCT 1615533 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| | ||| |||||||| || || | || ||||| ||| Sbjct 1615532 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCC 1615473 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || |||||||| || | || ||||| || ||||| || Sbjct 1615472 TGGATCTTCGACTTAACATTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTT 1615413 Query 211083 TTTCCCGTGAGAGTCTTTAC 211102 ||||| || || ||||| || Sbjct 1615412 TTTCCAGTCAGGGTCTTGAC 1615393 >seq7 Length=1663411 Score = 127 bits (140), Expect = 5e-24 Identities = 138/182 (76%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 || |||||||| || || ||||| | ||||| || |||||||| || |||||||| Sbjct 873669 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 873728 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || ||||||||||| |||| || ||||||||||||||||| || ||||| ||| Sbjct 873729 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 873788 Query 211047 ATGGTGTCAGAGCT---TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 |||||||| ||| || || ||||| || || ||||| ||||| || ||||| || Sbjct 873789 ATGGTGTC---GCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACG 873845 Query 211104 AA 211105 || Sbjct 873846 AA 873847 >seq9 Length=1465924 Score = 125 bits (138), Expect = 2e-23 Identities = 99/119 (83%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| |||||||| || ||||| || |||||||| ||||||| ||| || | ||||| Sbjct 863297 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCC 863238 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 || ||||||||||| |||||||| ||||| ||||||||||| |||| || |||||||| Sbjct 863237 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGGGGAATACCCTCCTTGTC 863179 >seq3 Length=2743392 Score = 120 bits (132), Expect = 7e-22 Identities = 193/276 (70%), Gaps = 6/276 (2%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTCTG---CAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||| ||||| || ||| ||||| ||||| |||||||| | || Sbjct 1451624 GTTCTTCTGGTTACTCTTCTTGTTGCAA---GCATCCTTGTAGAGCATGAAGGGGTTACC 1451680 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||||| || ||| | |||||| | ||| |||| ||| || || ||||| Sbjct 1451681 AGTCTCAGTCTGGGCCTCAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCG 1451740 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || | ||||||||| |||||| | ||||| || || |||||||| Sbjct 1451741 GCCACGGCCCTCCTGCTCGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATC 1451800 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | |||||||| ||||| |||||||||||||| |||| | ||||| ||| || || Sbjct 1451801 AGCCAGACCGGGGGCCTCGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACG 1451860 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||||||||||| || | |||||| | || ||||| Sbjct 1451861 CTTCATGAAGAGATCGGGGGTCCACAAAGCGTAGAA 1451896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150886127375