Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5 152 1e-31 seq7 98.7 2e-15 seq75 93.3 1e-13 >seq5 Length=1939333 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || |||||||| ||||| || || |||| || || || | | ||| Sbjct 1616058 ACGCAGACGCAACACCAGGTGGAGTGTGGACTCCTTCTGGATGTTATAGTCCGAAAGAGT 1615999 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||| || || |||||||| |||||||||||||| || || ||||| || || ||||| Sbjct 1615998 ACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGGATACC 1615939 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || || |||||||||||| | || || || | Sbjct 1615938 CTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCAATGGTGTCTGAGCTCTCAACCTCGAG 1615879 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||| ||||| || |||||||| || | ||| | |||||| Sbjct 1615878 CGTGATAGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1615837 Score = 122 bits (134), Expect = 2e-22 Identities = 141/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| || |||||||| |||| ||||| |||| | ||| | |||||| Sbjct 1615592 AGGACGAGGTGGAGGGTCGATTCTTTCTGGATGTTGTAGTCGGAAAGAGTACGGCCATCT 1615533 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | || ||||||||||| || || || ||||| || Sbjct 1615532 TCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGTTGGTCGGGGGGGATGCCCTCCTTATCC 1615473 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| |||||||| || || || || || | ||||| || Sbjct 1615472 TGGATCTTCGACTTAACATTGTCGATGGTATCGCTGGACTCGACCTCAAGGGTGATGGTT 1615413 Query 225682 TTGCCCGTCA 225691 || || |||| Sbjct 1615412 TTTCCAGTCA 1615403 >seq7 Length=1663411 Score = 98.7 bits (108), Expect = 2e-15 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| ||| || || | ||||| || |||||||| || |||||||| Sbjct 873669 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 873728 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || || |||||||| || ||||| || |||||||| |||||||| ||| || ||| Sbjct 873729 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 873788 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704 |||||||| | || || || | || || ||||| ||||||| || || | ||| Sbjct 873789 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 873847 >seq75 Length=28126 Score = 93.3 bits (102), Expect = 1e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 7566 TATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGG 7625 ||| || || |||||||| | | ||||||||||| | |||||||| | | || || Sbjct 12180 TATAATAACAGCGCATGCTATCTTGATGATTTTCTTCATGGTTATGCCTGCATTAATTGG 12121 Query 7626 CGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAG 7685 ||||| || |||| || | || ||| | |||| | ||| |||||||| ||||| || Sbjct 12120 AGGTTTTGGTAATTTCTTATTACCATTACTAGTTGGAGGTCCAGATATGGCATTTCCTAG 12061 Query 7686 GCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATTTCTA 7731 | || |||||||||||||||||| || ||| |||||| || Sbjct 12060 ATTAAATAATATAAGTTTTTGATTATTAGTTCCTAGTTTATTTTTA 12015 Score = 91.5 bits (100), Expect = 4e-13 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTG--ATAAAGGATAGGATCGCCTCCGCCT 370729 ||||||||| ||||| ||||||||||||||||| ||||| |||||||| || || || Sbjct 11622 TTCAGGATGTCCAAAGAATCAGAATAAATGTTGGAATAAA--ATAGGATCACCACCACCA 11679 Query 370730 GATGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 | | ||||||||| ||||| || |||||||||||||| Sbjct 11680 GCTACTTCAAAAAAGGATGTATTGAAGTTTCTATCAGTTAA 11720 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192530054052050