Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq5 156 9e-33 seq7 152 1e-31 seq9 120 6e-22 seq8 91.5 3e-13 >seq5 Length=1939333 Score = 156 bits (172), Expect = 9e-33 Identities = 175/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || | ||||| || | ||| || || |||||||| ||||| | | Sbjct 1616063 CCACCACGCAGACGCAACACCAGGTGGAGTGTGGACTCCTTCTGGATGTTATAGTCCGAA 1616004 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || || || ||||| | ||| || |||||| || Sbjct 1616003 AGAGTACGCCCGTCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGG 1615944 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 |||||||||||||| |||||||| ||| || ||| | || || ||||| || ||| || | Sbjct 1615943 ATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCAATGGTGTCTGA-GCTCTCAA 1615886 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| ||||| ||||| || ||||||||||| ||||| || ||||| Sbjct 1615885 CCTCGAGCGTGATAGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 1615837 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || ||||| |||||||| | Sbjct 1615836 ACCACCACGTAGACGGAGGACGAGGTGGAGCGTTGACTCCTTCTGGATATTGTAGTCGGA 1615777 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || || || || || || ||||| | ||| || ||||| || Sbjct 1615776 AAGAGTACGGCCATCTTCAAGCTGCTTGCCTGCGAAGATGAGACGCTGCTGGTCGGGGGG 1615717 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| ||||| ||||| | || || ||||||||||||| || | ||||| Sbjct 1615716 AATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTGTCGGATGACTCGAC 1615657 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| || || || ||||| || || | ||||| ||||| |||||||| Sbjct 1615656 TTCAAGTGTAATAGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 1615609 Score = 141 bits (156), Expect = 2e-28 Identities = 162/218 (74%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | || |||||| |||||||||||||| | Sbjct 1615608 ACCACCACGTAGACGAAGGACGAGGTGGAGGGTCGATTCTTTCTGGATGTTGTAGTCGGA 1615549 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || || || || |||||||||||||| || |||||||| || Sbjct 1615548 AAGAGTACGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGTTGGTCGGGGGG 1615489 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || |||||||| || |||||||| | || || | ||||| || || | ||||| Sbjct 1615488 GATGCCCTCCTTATCCTGGATCTTCGACTTAACATTGTCGATGGTATCGCTGGACTCGAC 1615429 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 || || ||||| || || || |||| ||||| |||| Sbjct 1615428 CTCAAGGGTGATGGTTTTTCCAGTCAGGGTCTTGACGA 1615391 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| |||||||| || || || | || || || || ||||| || || | Sbjct 1615321 CCACCACGGAGGCGAAGGACGAGGTGGAGTGTAGACTCCTTCTGAATGTTATAATCGGAG 1615262 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||||||||| || || || || |||||||||||||| || || |||||| || Sbjct 1615261 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCAGGAGGG 1615202 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| | || ||| | |||||||| || | || || Sbjct 1615201 ATGCCCTCCTTATCCTGGATCTTCGACTTAACGTTGTCGATAGTATCGCTGGACTCAACC 1615142 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| ||||| || || Sbjct 1615141 TCAAGGGTGATGGTCTTGCCAGT 1615119 >seq7 Length=1663411 Score = 152 bits (168), Expect = 1e-31 Identities = 141/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || |||||||||||||| || || || ||||| |||||| Sbjct 873669 TTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATC 873728 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | ||| ||||||||| ||||| ||||||||||| |||||||| | || ||| | ||| Sbjct 873729 AGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGTCG 873788 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| | ||||| ||||| || || ||||||||||||| ||||| ||||| Sbjct 873789 ATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGAA 873847 >seq9 Length=1465924 Score = 120 bits (132), Expect = 6e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||||||||| || || || || | || || || ||||||||||| || | Sbjct 863313 ACCACCACGCAGGCGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 863254 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||| || ||||||||| || Sbjct 863253 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGTTGGTCAGGGGG 863194 Query 282992 AATACCCTCCTTGTCT 283007 |||||||||||||||| Sbjct 863193 AATACCCTCCTTGTCT 863178 >seq8 Length=1516133 Score = 91.5 bits (100), Expect = 3e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 230191 AGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGG 230250 |||||||| | |||||| |||| || |||| | |||||||| | | || ||| Sbjct 1131693 AGGAGTTCCTGACTGACGCTCTTCCCTGTGGTCTGCTTGGCATGAACTCCAAGCTGATGT 1131634 Query 230251 GGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGT 230310 | | || || || ||||| ||||| || | || ||||| || || || |||| | Sbjct 1131633 GCGAGTACATTGAGTTCGTCGCTGACCGCCTGTTGGTGGCCCTCGGCAACAAGAAGTACT 1131574 Query 230311 ATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACT 230370 | ||| | | |||||||||| || |||||| ||| || || || || || |||| Sbjct 1131573 ACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCTCCCTGGCTGGCAAGACCAACT 1131514 Query 230371 TCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 ||||||| ||||||||| | || || || | | | ||||| Sbjct 1131513 TCTTCGAGAAGCGTGTCGGTGACTACCAGAAGGCTGGTGT 1131474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738194149050