Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20polonicum_20[genbank_20GCA_5F002072265.1_202017-03-24] 75 sequences; 32,404,688 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq5 176 1e-38 seq7 114 3e-20 seq3 89.7 1e-12 seq9 84.2 5e-11 >seq5 Length=1939333 Score = 176 bits (194), Expect = 1e-38 Identities = 165/210 (79%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || ||||| || ||||| |||||||| || ||||||||| Sbjct 1615840 CAAATCTTCGTCAAGACTTTGACCGGAAAGACTATCACGCTCGAGGTTGAGAGCTCAGAC 1615899 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || |||||||| |||||||| Sbjct 1615900 ACCATTGACAACGTCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAG 1615959 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || ||||| || || || | |||||| | || |||||| || Sbjct 1615960 CGTCTTATCTTCGCTGGTAAGCAGCTGGAGGACGGGCGTACTCTTTCGGACTATAACATC 1616019 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTG 178133 || || || || ||||| || || || ||| Sbjct 1616020 CAGAAGGAGTCCACACTCCACCTGGTGTTG 1616049 Score = 116 bits (128), Expect = 9e-21 Identities = 138/187 (74%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAAC 178002 |||| || || || |||||||| ||||| || | || || ||||| ||||| || Sbjct 1615117 TCACTGGCAAGACCATCACCCTTGAGGTTGAGTCCAGCGATACTATCGACAACGTTAAGT 1615176 Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062 ||||| ||||| || || || |||||||| |||||||| || | ||||| ||||| | Sbjct 1615177 CGAAGATCCAGGATAAGGAGGGCATCCCTCCTGACCAGCAGCGCTTGATCTTTGCCGGCA 1615236 Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122 | ||||| |||||||| | || || ||||||||||| | || || || || ||||| | Sbjct 1615237 AGCAGCTTGAAGATGGCCGCACCCTCTCCGATTATAACATTCAGAAGGAGTCTACACTCC 1615296 Query 178123 ATCTTGT 178129 | || || Sbjct 1615297 ACCTCGT 1615303 >seq7 Length=1663411 Score = 114 bits (126), Expect = 3e-20 Identities = 136/183 (74%), Gaps = 6/183 (3%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACAC 177985 |||||| || || || || || || || || |||||||| || || ||| ||||| Sbjct 873848 TTTCGTCAAGACCCTGACGGGTAAGACCATTACCCTCGATGTCGAGTCGAGC---GACAC 873792 Query 177986 CATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACG 178045 |||||| |||||||| ||||| |||||||| || || || || || ||||| || || Sbjct 873791 CATCGACAACGTCAAGACCAAGATCCAGGACAAGGAGGGCATTCCCCCTGACCAACAGCG 873732 Query 178046 ACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCA 178105 || |||||||||||||| |||||||| ||||| | || || ||| || ||| |||| Sbjct 873731 TCTGATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATCCA 873672 Query 178106 AAA 178108 || Sbjct 873671 GAA 873669 >seq3 Length=2743392 Score = 89.7 bits (98), Expect = 1e-12 Identities = 132/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 214202 CAAGAATGTGATGCCAGAGTTCTTGGGCCTTCACGACCTTTTTGGCTCTTCCCTCGTTTT 214261 |||||||| | |||||| | || ||||| | | ||| | | | ||||| | | Sbjct 1451698 CAAGAATGGCGTACCAGAGCTTCTGAGCCTTGATGGTCTTGCGGCCACGGCCCTCCTGCT 1451757 Query 214262 CGTACTTTTCATAAAGAGACTCAAATTCCGAACCGTAGACATCATCAAGACCGGGAGCCT 214321 ||||||| | || |||| || || || ||||||||||||| | |||||||| |||| Sbjct 1451758 CGTACTTCGCGTAGAGAGCATCGAACTCATCACCGTAGACATCAGCCAGACCGGGGGCCT 1451817 Query 214322 CGTTGGGGCAGAAAAGACTCCATTGTCCATTATCCCTGACTCTTTTCATGAAAAGGTCGG 214381 ||||||||||||| || |||| | || || || || | |||||||| || |||| Sbjct 1451818 CGTTGGGGCAGAAGAGGGTCCAGTCACCGTTGGCCTCAACACGCTTCATGAAGAGATCGG 1451877 Query 214382 AAGTCCA 214388 ||||| Sbjct 1451878 GGGTCCA 1451884 >seq9 Length=1465924 Score = 84.2 bits (92), Expect = 5e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| || || || || || ||||| || || || ||||||||||| || |||||||| Sbjct 863179 GACAAGGAGGGTATTCCCCCTGACCAACAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAG 863238 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 ||||| | |||||| | ||||| ||| |||| || || || || || || || || Sbjct 863239 GATGGCCGCACTCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 863294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730043289550