Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq67 95.1 1e-14 >seq67 Length=141994 Score = 95.1 bits (104), Expect = 1e-14 Identities = 196/289 (68%), Gaps = 7/289 (2%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || ||||||||||| || ||| |||| ||||| ||||||||||| ||||| Sbjct 90255 ATGTAGGTATCGATGAGCAGAGAGTAGGTTTCAGAGTGGATGTTCTCCATCATGATCTGG 90314 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| ||||| || | || ||||| || | ||| || || | || Sbjct 90315 AAGCCGTAGAAGCAACGGGCCTCGGGGATCTGAACCTCTCCACTGAAGCGCTCAACAAGG 90374 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATA- 17412 || ||||| || || |||||| |||||||| || || | | || | ||| || Sbjct 90375 TTCTCGTTGACAATACCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGACGAAGTAA 90434 Query 17413 --TTTTTCGTCCGGTGTAA--GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTT 17468 | ||||| || || | | ||||||| | | ||| ||||| | ||| | | Sbjct 90435 CGCTCATCGTC--GTTCAAGCGGTTGTGCCAGTCGTGAAGATCCTTGGAAAGATCGATCT 90492 Query 17469 CTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | |||| |||||| ||| |||| | ||||| || ||||| | ||| || Sbjct 90493 CCTCGGCGGTCCAGAAAGAAGCCTCGGCCTTCTTGTACATTTGCCAGAT 90541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542831131040