Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq12 104 2e-17 >seq12 Length=470192 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || || ||||| | || ||||||||| | ||| || || ||||| ||||||||||| || Sbjct 270744 CCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGAA 270803 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || |||| | || |||| |||||| || ||||| || || ||||||||||| || Sbjct 270804 AGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGA 270863 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | || || Sbjct 270864 ATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCACC 270923 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || ||||| | ||| || |||||||| ||||| Sbjct 270924 TCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970 Score = 100 bits (110), Expect = 2e-16 Identities = 142/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||||| ||| |||||||| ||||| ||||| ||||| ||| |||| Sbjct 271215 AGGACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCC 271274 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||| ||||||||| || || || | ||||||||||| ||| | || ||||||||| Sbjct 271275 TCCAGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 271334 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 |||||| ||| | | | | || | |||| | || || || || | || ||||| Sbjct 271335 TGGATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTC 271394 Query 34358 TTGCCGGTGAGAGTTTTCAC 34377 || ||||| || || || || Sbjct 271395 TTTCCGGTCAGGGTCTTGAC 271414 Score = 95.1 bits (104), Expect = 8e-15 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34198 TTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAA 34257 ||| ||||| |||||||| ||||| || || | || || | |||||| || || || Sbjct 271007 TTCCTTCTGGATGTTGTAATCGGAAAGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAA 271066 Query 34258 AATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATC 34317 ||||| || |||||||| ||| | || |||||| || ||||| ||| | || Sbjct 271067 GATGAGACGTTGCTGGTCAGGGGGAATGCCCTCCTTATCTTGAATCTTGGACTTCACATT 271126 Query 34318 GGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCAC 34377 | || | ||||| || ||||| || | ||||| || ||||||||||| || || || Sbjct 271127 ATCGATAGTATCGGATGACTCGACTTCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGAC 271186 Query 34378 AAAGATCTGCAT 34389 || |||||||| Sbjct 271187 GAAAATCTGCAT 271198 Score = 95.1 bits (104), Expect = 8e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || ||||| || | ||| || ||||| ||||| ||||||||| Sbjct 271486 CCGCCACGGAGGCGAAGGACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGAC 271545 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | |||||| || || || || | ||||||||||| ||| Sbjct 271546 AGTGTGCGACCGTCCTCGAGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGA 271605 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| |||||| ||| | || | | || | |||| | || || || Sbjct 271606 ATGCCCTCCTTGTCCTGGATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACC 271665 Query 34343 TCCACCGTGATGGTTTTGCCGGTGA 34367 || | |||||||| ||||| |||| Sbjct 271666 TCAAGGGTGATGGTCTTGCCAGTGA 271690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070314775680