Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq12 127 2e-24 seq15 96.9 3e-15 >seq12 Length=470192 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 45109 GCCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTT 45168 |||||| | || | || |||| |||||| |||||||||||||| ||||||||||| Sbjct 270743 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 270802 Query 45169 CAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGG 45228 || || | || ||||| || || || ||||| || | ||||| ||||| ||||| Sbjct 270803 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 270862 Query 45229 CACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCAC 45288 | ||||||||||||| ||| || ||| || | | | |||| | |||||| Sbjct 270863 AATACCCTCCTTGTCCTGAATCTTGCTCTTGACGTTGTCGATGGTGTCTGAGCTCTCCAC 270922 Query 45289 CTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 ||| | || || ||||| || |||| |||||| |||||||||||||| Sbjct 270923 CTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || ||| ||| ||||| ||||| ||||| ||| ||| |||| ||| Sbjct 271218 ACCAAGTGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCC 271277 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || ||||| || ||||| ||||| ||||| || || | |||||||||||| Sbjct 271278 AGCTGCTTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGG 271337 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | | || | | ||| ||||| | |||||| ||||| Sbjct 271338 ATCTTTGACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTT 271397 Query 45308 CCCGTCAGAGTCTTCAC 45324 || ||||| ||||| || Sbjct 271398 CCGGTCAGGGTCTTGAC 271414 Score = 95.1 bits (104), Expect = 1e-14 Identities = 132/185 (71%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| || || ||| ||||||||| ||||| |||||| |||| |||| |||| || Sbjct 271504 ACCAGATGGAGAGTGGACTCCTTCTGGATGTTATAGTCGGACAGTGTGCGACCGTCCTCG 271563 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || |||||||| || ||||| ||||| ||||| || || | |||||||||||| Sbjct 271564 AGCTGCTTTCCGGCAAAGATCAAACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 271623 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || ||| ||| || | | | | || | ||| ||||| | ||| || |||||| Sbjct 271624 ATCTTTGACTTGACATTGTCGATGGTATCGCTGGACTCAACCTCAAGGGTGATGGTCTTG 271683 Query 45308 CCCGT 45312 || || Sbjct 271684 CCAGT 271688 >seq15 Length=439316 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45147 CCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATA 45206 ||||||| |||||||||||| |||| ||| | || || || || || |||||||| | Sbjct 139621 CCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGA 139680 Query 45207 TCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCG 45266 ||| ||||||||||| || || | |||||||||||| || || ||| || Sbjct 139681 TCAGACGCTGTTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTGGTCTTGACGTTGT 139740 Query 45267 CCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAA 45326 | | | |||| | ||| || || | |||||| ||||| |||||||| ||||| || | Sbjct 139741 CGATGGTGTCGCTCGACTCGACATCGAGGGTAATGGTCTTACCCGTCAGGGTCTTGACGA 139800 Query 45327 A 45327 | Sbjct 139801 A 139801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395073139188988