Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq198 181 1e-40
seq67 116 5e-21
>seq198
Length=8267
Score = 181 bits (200), Expect = 1e-40
Identities = 735/1144 (64%), Gaps = 18/1144 (2%)
Strand=Plus/Minus
Query 62948 AGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCA 63007
||| ||||| || || || || ||||||| || | || | || |||||||||||
Sbjct 5346 AGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCGATAATCTCAGTGCA 5287
Query 63008 AAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 63067
|| ||| | ||||| || | || | || |||||||| ||||| || |||||
Sbjct 5286 CAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAAGCATC 5227
Query 63068 CTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 63127
||| || || ||||| || ||||||| ||| |||| | || | ||| || | |||||
Sbjct 5226 CTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTACCAGA- 5168
Query 63128 GACTC-GAGCCTTTATTATAGATTTGTATCTCCTTTCTCTT--TCGTA--TAGAGTATAC 63182
| || ||||||| || | || | | ||| | ||||| | | ||| |
Sbjct 5167 GCTTCTGAGCCTTGATGGTC--TTGCGGCCACGGCCCTCCTGCTCGTACTTGGCGTAGAG 5110
Query 63183 AATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATC 63242
| | |||||||| || || | |||| | | | ||| |||| || || |
Sbjct 5109 AGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGGCAGAAG 5052
Query 63243 AACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGC- 63301
| || ||| || |||| ||| || || ||||| |||||||| || |||| |||||
Sbjct 5051 AGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCACAGAGCG 4992
Query 63302 TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAA 63361
|| ||| || || | | | | ||||| || || |||||| |||||||||||
Sbjct 4991 TAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATCGAGGAA 4933
Query 63362 CGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTT 63421
| | | | ||| | |||||||| |||| ||| ||||| | | || || || |||||
Sbjct 4932 CTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCGCTTGTT 4873
Query 63422 TCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 63481
|| ||||| || | || | |||||||| ||| | || | || ||| |||| ||||||
Sbjct 4872 ACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAACAATACC 4813
Query 63482 GTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATT 63539
||| || || ||||| || | || || || | || ||||| | |||
Sbjct 4812 GTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTGGACATT 4753
Query 63540 GATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAG 63599
| ||||| || || || || | || ||||| | || || || | || |||||
Sbjct 4752 G--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTATCATAA 4695
Query 63600 ATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGA 63659
|| || || ||||| || || ||| || || || || || | | ||| | |
Sbjct 4694 ATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGGGGTTGG 4635
Query 63660 GTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGA 63719
| ||| | ||||| || | || || || ||||| || || | |||| || | |
Sbjct 4634 GGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGACATCAAG 4575
Query 63720 TTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATT 63779
| ||| |||||||| || || || ||| |||||||| || || ||||||||
Sbjct 4574 TGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACACGCATC 4515
Query 63780 AACATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCC 63839
| || ||||||||| | ||| ||| ||| ||| || | | ||| || ||
Sbjct 4514 AGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGACCGCTCG 4455
Query 63840 AAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTG 63899
| || ||||| || || |||||||| ||||| || ||||| | |||| |||| |||
Sbjct 4454 AGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCCGAGTTG 4395
Query 63900 AGCTTATCCTTATATTTGTTAACTATATCCATGGTAAT-ACTTGAAATAATCGGAGAATG 63958
|||| || || || |||| || | | | || | | ||| || || |||| |
Sbjct 4394 AGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGGAGCGGG 4336
Query 63959 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 64018
|| ||||| || || ||||| | | | | ||| || || ||| | ||
Sbjct 4335 CTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAATTGCTT 4276
Query 64019 ttttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATAATCCGG 64078
|||||||| |||||| || || || | ||| || | || || |||||||| || || ||
Sbjct 4275 TTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTAGTCGGG 4216
Query 64079 ATGT 64082
|||
Sbjct 4215 GTGT 4212
>seq67
Length=141994
Score = 116 bits (128), Expect = 5e-21
Identities = 118/154 (77%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632
|||| || ||| || || || ||| |||||||| || | || || ||||| ||
Sbjct 89920 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 89979
Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692
|| ||||| || ||||||||||||||||| || ||||| || ||||| |||||||| |||
Sbjct 89980 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 90039
Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAA 33726
|| |||||||| || || || || || |||||||
Sbjct 90040 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 90073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629814230475840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |