Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq198 203 5e-47 seq67 114 2e-20 >seq198 Length=8267 Score = 203 bits (224), Expect = 5e-47 Identities = 744/1150 (65%), Gaps = 20/1150 (2%) Strand=Plus/Minus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| ||| ||||| || ||||| || ||||||| || | || | || || ||| Sbjct 5351 GCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGGGGCACTGTACTCGATAATCTCA 5292 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| |||||| | ||| || || | || | || |||||||| ||||| || Sbjct 5291 GTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTTGCAA 5232 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || ||||| || ||||||| ||| |||| | || | ||| || | | Sbjct 5231 GCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGCGTAC 5172 Query 79795 CAGACGACTC-GAGCCTTTATTATAGACTTGTATCT-CTTTTCTCTT--TCGTATT--GT 79848 |||| | || ||||||| || | |||| | | ||| | ||||| | | Sbjct 5171 CAGA-GCTTCTGAGCCTTGATGGT---CTTGCGGCCACGGCCCTCCTGCTCGTACTTGGC 5116 Query 79849 GTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGA 79908 ||| | | | |||||||| || || | ||||| ||| ||||| || | || Sbjct 5115 GTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTGGGG 5058 Query 79909 CACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAA 79968 || | | || ||| || || | ||| || || ||||| |||||||| || |||| Sbjct 5057 CAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTCCAC 4998 Query 79969 AGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATC 80027 ||||| || ||| || || | | | | |||||| || || |||||| ||||| Sbjct 4997 AGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAGATC 4939 Query 80028 GAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCG 80087 ||||||| | | | ||| | |||||||| |||| ||| ||||| | | || || || Sbjct 4938 GAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGGGCG 4879 Query 80088 TTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAAT 80147 ||||| || ||||| || | || | |||||||| ||| | || | || ||| |||| Sbjct 4878 CTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGGAAC 4819 Query 80148 AATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTA 80205 |||||| ||||| | || ||||| || | || || || | || ||||| | Sbjct 4818 AATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCGGTG 4759 Query 80206 CTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTA 80265 |||| ||||| || || || || | || ||||| | || || || | ||| Sbjct 4758 GACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGAGTA 4701 Query 80266 TCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG 80325 ||||| || ||||| ||||| || | ||| || || || || || | | ||| Sbjct 4700 TCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGCTGG 4641 Query 80326 TGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAC 80385 | | ||| | ||||| || | || || || ||||| || || | |||| ||| Sbjct 4640 GGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGGGAC 4581 Query 80386 AGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACA 80445 | | | ||| |||||||| || || || ||| |||||||| || || ||| Sbjct 4580 ATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCAACA 4521 Query 80446 CGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGAT 80505 ||||| | || ||||||||| | ||| | | ||| || || | | ||| || Sbjct 4520 CGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTATGAC 4461 Query 80506 TTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACC 80565 || | || ||||| || || |||||||| ||||| || ||||| | |||| || Sbjct 4460 CGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATAGCC 4401 Query 80566 GAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGAT-ACTTGAAATAATCGG 80624 |||||||| | || || || |||| | | | | ||| | | ||| || || || Sbjct 4400 GAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCATAGG 4342 Query 80625 AGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAA 80684 || | || ||||| || || ||||| | | | | ||| || || || Sbjct 4341 AGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGAGAA 4282 Query 80685 TAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATA 80744 | | |||||||||| |||||| || || || ||||| || | || || | |||||| || Sbjct 4281 TTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGCGTA 4222 Query 80745 ATCTGGATGT 80754 || || ||| Sbjct 4221 GTCGGGGTGT 4212 >seq67 Length=141994 Score = 114 bits (126), Expect = 2e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| || ||| || || || ||| |||||||| || | || | |||||||| Sbjct 89920 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 89979 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||||||||||||||| || ||||| || ||||| || ||||| || Sbjct 89980 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 90039 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAG 50108 || |||||||| || || || ||||| |||||||| || Sbjct 90040 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAACCAG 90077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264957261920