Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq12 89.7 4e-13 >seq12 Length=470192 Score = 89.7 bits (98), Expect = 4e-13 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 42882 GCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGA 42941 ||| |||||||| | ||||||| || | |||||||||||| || | ||||| || || Sbjct 270743 GCCACCACGCAGACGCAACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA 270802 Query 42942 CAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGG 43001 | ||||| | || |||| || || || || || || | ||||| || || | || Sbjct 270803 AAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGG 270862 Query 43002 CACACCTTCTTTTTCGCTG-ATC-AACTCTTTGACTCTGCCAACTGTGTCGCCAGC-CTC 43058 | ||| || || || ||| ||| ||| ||||| || | | ||||| ||| ||| Sbjct 270863 AATACCCTCCTTGTC-CTGAATCTTGCTC-TTGACGTTGTCGATGGTGTC-TGAGCTCTC 270919 Query 43059 GACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || |||| || ||||| |||||||| | ||| || ||||| |||||||| Sbjct 270920 CACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381367610680824