Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq198 181 1e-40
seq67 111 2e-19
>seq198
Length=8267
Score = 181 bits (200), Expect = 1e-40
Identities = 741/1153 (64%), Gaps = 24/1153 (2%)
Strand=Plus/Minus
Query 71697 GGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCA---TATTGTATAAT 71753
||| | ||| ||||| || ||||| || ||||||| || |||| || | |||||
Sbjct 5352 GGCGAGAGAAGCCAGGTTGCAAACAGCCACCTCATCAGG---GGCACTGTACTCGATAAT 5296
Query 71754 TTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 71813
|||||||| || ||| | || || || | || | || |||||||| |||||
Sbjct 5295 CTCAGTGCACAGGTTAGAGCTGCGAATAGTACCCAGGTTCTTCTGGTTACTCTTCTTGTT 5236
Query 71814 ACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 71873
|| |||||||| || || || || || ||||||| ||| |||| | || | ||| ||
Sbjct 5235 GCAAGCATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCAGTCTGGGCCTCGAGAATGGC 5176
Query 71874 TTTCCAGACGACTC-GAGCCTTTATTATATTCTTGTATCTCTTTTCTCTT--TCGTATT- 71929
| ||||| | || ||||||| || | || | | | ||| | ||||| |
Sbjct 5175 GTACCAGA-GCTTCTGAGCCTTGATGGTCTTGCGGC--CACGGCCCTCCTGCTCGTACTT 5119
Query 71930 -GTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTC 71988
| ||| | | | |||||||| || || | ||| ||| ||||| |||||
Sbjct 5118 GGCGTAGAGAGCC--TCGAACTCATCACCGTAGACATCAGCTAGGCCAGGGGCCTCATTG 5061
Query 71989 GGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATC 72048
|| || | | | ||| || || | | | || || ||||| |||||||| || ||
Sbjct 5060 GGGCAGAAGAGCGTCCAGTCACCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGGTC 5001
Query 72049 CAAAGAGC-TATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAG 72107
|| ||||| || ||| || || | | | | |||||| || || |||||| ||
Sbjct 5000 CACAGAGCGTAGAAA-AGGTCACGAGCGCGAACCTCCTCCTTACCGTGATTCTTGCGCAG 4942
Query 72108 ATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGG 72167
|||||||||| | | | ||| | |||||||| |||| ||| ||||| | | || ||
Sbjct 4941 ATCGAGGAACTCGAAGACATCGGCGTGCCACGGCTCCAGGTAGATGGCAAAGGCACCGGG 4882
Query 72168 CCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGG 72227
|| ||||| || ||||| || | || | |||||||| ||| | || | || ||| ||
Sbjct 4881 GCGCTTGTTACCACCCTGGTCCACATAACGTGCGGTGTTGTTAAACACACGCAGCATAGG 4822
Query 72228 AATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--A 72285
|| |||||| ||||| | || ||||| || | || || || | || |||||
Sbjct 4821 AACAATACCGTTGGAGGAGCCGTTGGTTCCAGCAATGTAAGAACCGGTAGCGCGAATGCG 4762
Query 72286 TTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 72345
|| |||| ||||| || || || || | || ||||| | || || || |
Sbjct 4761 GTGGACATTG--AGACCGATACCACCAGCGGTCTTGGAGATCATGGCACAGGTCTTGAGA 4704
Query 72346 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 72405
|||||||| || ||||| || || || | ||| || || || || || | |
Sbjct 4703 GTATCATAAATACCCTCAATGCTGTCTGCGCTCACGTCAACCAGGAAGCAAGATGCGAGC 4644
Query 72406 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 72465
||| | | ||| | ||||| || | || || || ||||| || || | ||||
Sbjct 4643 TGGGGTTGGGGAGTAGCGGCATTGAACAGAGTGGGGGAGGCGTGAGTGAAGTACTTTTGG 4584
Query 72466 GACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCG 72525
|||| | | ||| |||||||| || || || ||| || ||||| || ||
Sbjct 4583 GACATCAAGTGGTATGTCTCAATGGCCTTCTCAATGTCCTCGCCGTGAATTCCGACAGCA 4524
Query 72526 ACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAG 72585
|||||||| | || |||||||| | ||| | | ||| || || | | |||
Sbjct 4523 ACACGCATCAGCAAGTGCTGAGGACGCTCAGCAACATTGCCGTTAATCCGAAGAAGGTAT 4464
Query 72586 GATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATA 72645
|| || | || ||||| || || |||||||| ||||| || ||||| | ||||
Sbjct 4463 GACCGCTCGAGGGTCTTAAATCCGAAGTAGTTGTAGTTGAAGTCACGGTCGTACACAATA 4404
Query 72646 ACCGAATTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGAT-ACTTGAAATAAT 72704
|||| ||||| | || || || |||| || | | | ||| | | ||| || ||
Sbjct 4403 GCCGAGTTGAGCTCCTCGGCATGCTTCATAACGATCT-CGTAGTGTTCATCTGAGATCAT 4345
Query 72705 CGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACT 72764
|||| | || ||||| || || ||||| | | | | ||| || ||
Sbjct 4344 AGGAGCGGGCTTATTGTTTTTGGGGTTGACATAATGGTAGAGATCGGAGATGACCATGGA 4285
Query 72765 AAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGC 72824
||| | |||||||||| |||||| || || || ||||| || | || || ||||||||
Sbjct 4284 GAATTGCTTTTTTGTTTGCTTGTGGAGGTTGGAAACGGCGATACGTGCAGCCAGAATGGC 4225
Query 72825 ATAATCTGGATGT 72837
|| || || |||
Sbjct 4224 GTAGTCGGGGTGT 4212
>seq67
Length=141994
Score = 111 bits (122), Expect = 2e-19
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115
|||| || ||| || || || ||| ||||||||||| | || || ||||||||
Sbjct 89920 AACAGCAGACAAGCAAAGTCAGTGTGGAGACCCTCATCACGGGAGATCAACTCGTTGGAG 89979
Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175
|| ||||| || ||||||||||||||||| || ||||| || || || || ||||| ||
Sbjct 89980 AAAGTGAGACCAGGCATTAGGCCACGCTTCTTCAGCCAGAAGATGGAGGCGAATGAGCCG 90039
Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAA 42209
|| |||||||| || || || || || |||||||
Sbjct 90040 GAGAAGAAGATACCCTCCACAGCGGCGAAGGCAA 90073
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671135609405280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |