Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq67 102 8e-17 seq12 82.4 8e-11 >seq67 Length=141994 Score = 102 bits (112), Expect = 8e-17 Identities = 162/227 (71%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCC-GTGGCATTGTTGGG 50690 || || |||| ||||| | ||||| |||| |||||| | ||| | ||| | |||| Sbjct 89867 GAGGCTGTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGG- 89809 Query 50691 CATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50750 ||||||||| | |||||||||||||||||||||| || || ||| | || || || Sbjct 89808 CATGAACGCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGC 89749 Query 50751 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50809 || || |||| ||| ||||| || || |||||||| || ||| | ||| | Sbjct 89748 CCTCGG-CAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCT 89690 Query 50810 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856 | |||| ||||| || ||||| ||||||| ||||| || || ||| Sbjct 89689 CCTTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTAC 89643 >seq12 Length=470192 Score = 82.4 bits (90), Expect = 8e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || |||| ||| | || | || | ||| ||||| || || |||||||||||| Sbjct 270972 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 271031 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||||| || || || || || || ||| |||| ||||||||||| || || || Sbjct 271032 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 271091 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 ||||| || || || ||| || || | | || | || || | | || ||| Sbjct 271092 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 271151 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185 |||| || | ||||||||||| | ||| || ||||| || |||||| Sbjct 271152 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 271199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011687472960