Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_004117.1
Length=158482
Score E
Sequences producing significant alignments: (Bits) Value
seq67 102 8e-17
seq12 82.4 8e-11
>seq67
Length=141994
Score = 102 bits (112), Expect = 8e-17
Identities = 162/227 (71%), Gaps = 4/227 (2%)
Strand=Plus/Minus
Query 50632 GAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCC-GTGGCATTGTTGGG 50690
|| || |||| ||||| | ||||| |||| |||||| | ||| | ||| | ||||
Sbjct 89867 GAGGCTGTCGGAATCGAGCAGGAGTTCCTCACTGACGCTCTTCCCTGCGGCCTGCTTGG- 89809
Query 50691 CATGAACGCAGACATGATGTGCGAGTACATTGAGTTTGTTGCAGACAGATTGTTGTTGCA 50750
||||||||| | |||||||||||||||||||||| || || ||| | || || ||
Sbjct 89808 CATGAACGCCAAGCTGATGTGCGAGTACATTGAGTTCGTCGCTGACCGCCTGCTGGTGGC 89749
Query 50751 GCTGGGACAAC-CGAAATACTATAATGCACGTAACCCCTTTCCGTTTATGAATAACATAT 50809
|| || |||| ||| ||||| || || |||||||| || ||| | ||| |
Sbjct 89748 CCTCGG-CAACAAGAAGTACTACAACGCTACCAACCCCTTCGACTTCATGGAGTCCATCT 89690
Query 50810 CGTTGGAGGGCAAAACAAACTTTTTCGAAAGACGTGTAGGCGAATAC 50856
| |||| ||||| || ||||| ||||||| ||||| || || |||
Sbjct 89689 CCTTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGTGACTAC 89643
>seq12
Length=470192
Score = 82.4 bits (90), Expect = 8e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017
|| || |||| ||| | || | || | ||| ||||| || || ||||||||||||
Sbjct 270972 CCACCACGTAGACGGAGGACAAGGTGGAGTGTGGATTCCTTCTGGATGTTGTAATCGGAA 271031
Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077
| ||||| || || || || || || ||| |||| ||||||||||| || || ||
Sbjct 271032 AGTGTGCGACCATCCTCAAGCTGCTTTCCGGCAAAGATGAGACGTTGCTGGTCAGGGGGA 271091
Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137
||||| || || || ||| || || | | || | || || | | || |||
Sbjct 271092 ATGCCCTCCTTATCTTGAATCTTGGACTTCACATTATCGATAGTATCGGATGACTCGACT 271151
Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 143185
|||| || | ||||||||||| | ||| || ||||| || ||||||
Sbjct 271152 TCAAGTGTGATAGTCTTGCCGGTGAGTGTCTTGACGAAAATCTGCATA 271199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 507011687472960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |