Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq198 107 3e-18 >seq198 Length=8267 Score = 107 bits (118), Expect = 3e-18 Identities = 320/487 (66%), Gaps = 10/487 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| || || || || || || || | ||| ||||| |||| || |||||||| || Sbjct 4864 CAGGGTGGTAACAAGCGCCCCGGTGCCTTTGCCATCTACCTGGAGCCGTGGCACGCCGAT 4923 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || || || || |||| ||||||| || || || |||| || || | ||| Sbjct 4924 GTCTTCGAGTTCCTCGATCTGCGCAAGAATCACGGTAAGGAGGAGGTTCGCGCTCGTGAC 4983 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAA---CGACGGTGGC 97052 | || || || || ||| || ||| | ||||||||||||||| | | |||||| Sbjct 4984 CTTTTCTACGCTCTGTGGACCCCCGATCTCTTCATGAAGCGCGTCGAGGCCAACGGTG-- 5041 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 |||||| || | |||||| | | | || || || | ||| || || || ||| Sbjct 5042 -ACTGGACGCTCTTCTGCCCCAATGAGGCCCCTGGCCTAGCTGATGTCTACGGTGATGAG 5100 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGC 97171 || ||||| ||| | |||||||| |||||||| || |||| | || | || Sbjct 5101 TTCGAGGCTCTCTACGCCAAGTACGAGCAGGAGGGCCGTGGCCGCAAGACCA-TCAAGGC 5159 Query 97172 ACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTC 97230 | |||| || ||| | ||||| | ||| ||| |||||||| | || | ||| | Sbjct 5160 TC-AGAAGCTCTGGTACGCCATTCTCGAGGCCCAGACTGAGACTGGTAACCCCTTCATGC 5218 Query 97231 TCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCT 97290 ||||||||||| | || || || ||||| || |||| || || ||| Sbjct 5219 TCTACAAGGATGCTTGCAACAAGAAGAGTAACCAGAAGAACCTGGGTACTATTCGCAGCT 5278 Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTC 97350 | || |||||||| || ||| | |||||| | || || ||| ||| |||||| | Sbjct 5279 CTAACCTGTGCACTGAGATTATCGAGTACAGTGCCCCTGATGAGGTGGCTGTTTGCAACC 5338 Query 97351 TGGCATC 97357 |||| || Sbjct 5339 TGGCTTC 5345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055235333280