Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq12 123 6e-23 >seq12 Length=470192 Score = 123 bits (136), Expect = 6e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 |||| || || |||||||| || ||||||||||| || || | |||||| || || || Sbjct 271224 TGTAGAGTGGACTCTTTCTGGATGTTATAGTCAGACAGGGTACGACCGTCCTCCAGCTGC 271283 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || ||||| || | | ||| || ||||| || || || || || ||||| |||||| Sbjct 271284 TTGCCGGCAAAGATCAAACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTT 271343 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 | || || || || | ||||||||||| || ||||| || ||||| ||||| || || Sbjct 271344 GACTTCACGTTGTCGATGGTATCGCTAGACTCAACCTCAAGGGTAATGGTCTTTCCGGTC 271403 Query 104537 AGTGTTTTTAC 104547 || || || || Sbjct 271404 AGGGTCTTGAC 271414 Score = 104 bits (114), Expect = 5e-17 Identities = 142/193 (74%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| || || ||||| || ||||| | || || || || || || ||||| || Sbjct 270780 TCCTTCTGGATGTTGTAGTCCGAAAGAGTACGGCCATCCTCCAGCTGCTTACCAGCGAAG 270839 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCT-TTTACATT 104487 || || | ||| || |||||||| || || || || ||||||||| ||||| || || || Sbjct 270840 ATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATC-TTGCTCTTGACGTT 270898 Query 104488 TTCTACGGTATCGCTAGGT-TCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTA 104546 || | ||| || || | || ||||||||||| |||||||| || || | || || | Sbjct 270899 GTCGATGGTGTC-TGAGCTCTCCACCTCTAGTGTGATAGTCTTTCCGGTCAAAGTCTTGA 270957 Query 104547 CAAATATCTGCAT 104559 |||| || ||||| Sbjct 270958 CAAAGATTTGCAT 270970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392086019024