Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06- 08] 428 sequences; 27,933,364 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq12 87.8 2e-12 >seq12 Length=470192 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573 ||||| | || || ||||||||||| || |||||||| || | || || || | || Sbjct 270759 AACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA-AAGAGTACGGCCATC 270817 Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633 ||||||||||||||| || | || | ||||||||| || || | || |||||||| Sbjct 270818 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 270877 Query 48634 CATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 | ||| || ||||| | | || ||||| || | |||| ||| | ||| || Sbjct 270878 CTGAATCTTGCTCTTGACGTTGTCG--ATGGTGTCTGAGCTCTCCACCTCTAGTGTGATA 270935 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 || || ||||| | ||| || ||||| || ||||| Sbjct 270936 GTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249002648428