Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Penicillium_20roqueforti_20[genbank_20GCA_5F000737485.2_202015-06-
08] 428 sequences; 27,933,364 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq12 87.8 2e-12
>seq12
Length=470192
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/215 (70%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 48515 AACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTC 48573
||||| | || || ||||||||||| || |||||||| || | || || || | ||
Sbjct 270759 AACACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCCGA-AAGAGTACGGCCATC 270817
Query 48574 CTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTC 48633
||||||||||||||| || | || | ||||||||| || || | || ||||||||
Sbjct 270818 CTCCAGCTGCTTACCAGCGAAGATAAGACGCTGCTGGTCAGGAGGAATACCCTCCTTGTC 270877
Query 48634 CATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691
| ||| || ||||| | | || ||||| || | |||| ||| | ||| ||
Sbjct 270878 CTGAATCTTGCTCTTGACGTTGTCG--ATGGTGTCTGAGCTCTCCACCTCTAGTGTGATA 270935
Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| | ||| || ||||| || |||||
Sbjct 270936 GTCTTTCCGGTCAAAGTCTTGACAAAGATTTGCAT 270970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421249002648428
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |